Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.104.v1.A.nonSL1-1

Possible name(s)

RDH13; RDH14

Gene model

KH2012:KH.C2.104

Location

KhC2 [360,921 / 365,790]

Sequences

Amino acid sequence

Length: 158

>KH.C2.104.v1.A.nonSL1-1
FLSNVVWCSVIMSVSKGWVTSNVTLEGKTALITGANSGIGKETTRELSKRGAKVIMACRD
LANAEEVKKSIIEEFPNAKVEVGKLDLGSLKSVREFAKSVNDNENRLDILINNAGVMCCP
QGKTEDGFEMHLGINHIGHFLLTNLLLDLIKAQASPVI

Nucleotide sequence

Length: 1,095

>KH2012:KH.C2.104.v1.A.nonSL1-1
GTTTCTTGTCTAACGTCGTCTGGTGCAGTGTTATTATGTCGGTGTCTAAGGGTTGGGTGA
CCAGCAATGTTACCTTGGAGGGCAAAACTGCCCTCATCACTGGTGCTAATTCAGGAATTG
GAAAAGAAACAACAAGGGAGCTATCAAAGCGAGGTGCAAAAGTTATTATGGCGTGCAGAG
ATCTTGCAAATGCTGAAGAAGTCAAAAAATCTATTATTGAAGAATTTCCAAATGCAAAAG
TTGAAGTGGGAAAATTAGATTTGGGATCGTTGAAATCTGTGAGAGAATTTGCAAAAAGTG
TAAATGACAATGAAAATAGATTGGATATTTTAATTAATAATGCAGGAGTTATGTGTTGCC
CTCAAGGCAAGACTGAGGATGGGTTTGAAATGCACTTGGGTATCAACCACATTGGACACT
TTCTCCTTACAAACCTTTTGTTGGATCTAATAAAAGCACAGGCGTCACCTGTAATTTGAT
TCATCCTGGTTTAGTTCTTACCAACCTTGGTAGGCATATGTATGGGGAAGGTCGATCAAT
TGGTAAACGTATCTTACATGCAATAACGTGGCCAATTGTGTTGTTGGTGTTCAAATCTCC
ACAGCGAGGAGCACAAAGCACAATATTTTGTGCAGTTGCTGAAGAATTGAAAAATACAAG
TGGAAAATATTACAACAGCGACAGTGAGGAAGAACAACTGTTGGATAAAGCTTTAAATGA
AGATGATGCACAAAAGTTGTGGAAAATCACAGAAAAACTGTGTGGATTAAATACAGATGC
TGATACAGCATAAATATTACTTTTTATAAGAAAATCCCACCTGCATGTGCTAATTTATCA
GTTGATGGACATGTAAATTTTATATATTTTGCACTCATACCTAATGGTCTTTTTTTTGCG
AGCAGTATTTAGTATTACAGTGGCAAATGGCCGCCAATGTGTTTAGTATTGTTGCAAAAT
GTGTCAGGAAATACATTTAAATATTGCATTGCATTTTATATCTTTAGGCATATCACAATT
TTTCCATATACTGTCATAATGAATATAATACTATTTGCATTCTTTTTTTATATACAACTT
ATTAATTCTTAACAG

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[22-156] 9.87E-37
Pfam	SDR_fam (IPR002347) - T[28-154] 3.8E-22
PRINTS	SDR_fam (IPR002347) - T[29-46] 3.8E-9 - T[105-116] 3.8E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	55.906 %	146	1.02E-43
RDH13_HUMAN	52.83 %	147	6.2E-44
RDH12_HUMAN	55.645 %	141	7.15E-42