Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.104.v1.A.nonSL3-1

Possible name(s)

RDH13; RDH14

Gene model

KH2012:KH.C2.104

Location

KhC2 [360,921 / 365,755]

Sequences

Amino acid sequence

Length: 147

>KH.C2.104.v1.A.nonSL3-1
MSVSKGWVTSNVTLEGKTALITGANSGIGKETTRELSKRGAKVIMACRDLANAEEVKKSI
IEEFPNAKVEVGKLDLGSLKSVREFAKSVNDNENRLDILINNAGVMCCPQGKTEDGFEMH
LGINHIGHFLLTNLLLDLIKAQASPVI

Nucleotide sequence

Length: 1,060

>KH2012:KH.C2.104.v1.A.nonSL3-1
ATGTCGGTGTCTAAGGGTTGGGTGACCAGCAATGTTACCTTGGAGGGCAAAACTGCCCTC
ATCACTGGTGCTAATTCAGGAATTGGAAAAGAAACAACAAGGGAGCTATCAAAGCGAGGT
GCAAAAGTTATTATGGCGTGCAGAGATCTTGCAAATGCTGAAGAAGTCAAAAAATCTATT
ATTGAAGAATTTCCAAATGCAAAAGTTGAAGTGGGAAAATTAGATTTGGGATCGTTGAAA
TCTGTGAGAGAATTTGCAAAAAGTGTAAATGACAATGAAAATAGATTGGATATTTTAATT
AATAATGCAGGAGTTATGTGTTGCCCTCAAGGCAAGACTGAGGATGGGTTTGAAATGCAC
TTGGGTATCAACCACATTGGACACTTTCTCCTTACAAACCTTTTGTTGGATCTAATAAAA
GCACAGGCGTCACCTGTAATTTGATTCATCCTGGTTTAGTTCTTACCAACCTTGGTAGGC
ATATGTATGGGGAAGGTCGATCAATTGGTAAACGTATCTTACATGCAATAACGTGGCCAA
TTGTGTTGTTGGTGTTCAAATCTCCACAGCGAGGAGCACAAAGCACAATATTTTGTGCAG
TTGCTGAAGAATTGAAAAATACAAGTGGAAAATATTACAACAGCGACAGTGAGGAAGAAC
AACTGTTGGATAAAGCTTTAAATGAAGATGATGCACAAAAGTTGTGGAAAATCACAGAAA
AACTGTGTGGATTAAATACAGATGCTGATACAGCATAAATATTACTTTTTATAAGAAAAT
CCCACCTGCATGTGCTAATTTATCAGTTGATGGACATGTAAATTTTATATATTTTGCACT
CATACCTAATGGTCTTTTTTTTGCGAGCAGTATTTAGTATTACAGTGGCAAATGGCCGCC
AATGTGTTTAGTATTGTTGCAAAATGTGTCAGGAAATACATTTAAATATTGCATTGCATT
TTATATCTTTAGGCATATCACAATTTTTCCATATACTGTCATAATGAATATAATACTATT
TGCATTCTTTTTTTATATACAACTTATTAATTCTTAACAG

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[11-145] 7.58E-37
Pfam	SDR_fam (IPR002347) - T[17-143] 2.9E-22
PRINTS	SDR_fam (IPR002347) - T[18-35] 3.4E-9 - T[94-105] 3.4E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	55.906 %	146	6.2E-44
RDH13_HUMAN	55.862 %	147	5.28E-44
RDH12_HUMAN	55.645 %	141	5.98E-42