Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.104.v1.A.nonSL5-1

Possible name(s)

RDH13; RDH14

Gene model

KH2012:KH.C2.104

Location

KhC2 [360,921 / 365,783]

Sequences

Amino acid sequence

Length: 156

>KH.C2.104.v1.A.nonSL5-1
SNVVWCSVIMSVSKGWVTSNVTLEGKTALITGANSGIGKETTRELSKRGAKVIMACRDLA
NAEEVKKSIIEEFPNAKVEVGKLDLGSLKSVREFAKSVNDNENRLDILINNAGVMCCPQG
KTEDGFEMHLGINHIGHFLLTNLLLDLIKAQASPVI

Nucleotide sequence

Length: 1,088

>KH2012:KH.C2.104.v1.A.nonSL5-1
GTCTAACGTCGTCTGGTGCAGTGTTATTATGTCGGTGTCTAAGGGTTGGGTGACCAGCAA
TGTTACCTTGGAGGGCAAAACTGCCCTCATCACTGGTGCTAATTCAGGAATTGGAAAAGA
AACAACAAGGGAGCTATCAAAGCGAGGTGCAAAAGTTATTATGGCGTGCAGAGATCTTGC
AAATGCTGAAGAAGTCAAAAAATCTATTATTGAAGAATTTCCAAATGCAAAAGTTGAAGT
GGGAAAATTAGATTTGGGATCGTTGAAATCTGTGAGAGAATTTGCAAAAAGTGTAAATGA
CAATGAAAATAGATTGGATATTTTAATTAATAATGCAGGAGTTATGTGTTGCCCTCAAGG
CAAGACTGAGGATGGGTTTGAAATGCACTTGGGTATCAACCACATTGGACACTTTCTCCT
TACAAACCTTTTGTTGGATCTAATAAAAGCACAGGCGTCACCTGTAATTTGATTCATCCT
GGTTTAGTTCTTACCAACCTTGGTAGGCATATGTATGGGGAAGGTCGATCAATTGGTAAA
CGTATCTTACATGCAATAACGTGGCCAATTGTGTTGTTGGTGTTCAAATCTCCACAGCGA
GGAGCACAAAGCACAATATTTTGTGCAGTTGCTGAAGAATTGAAAAATACAAGTGGAAAA
TATTACAACAGCGACAGTGAGGAAGAACAACTGTTGGATAAAGCTTTAAATGAAGATGAT
GCACAAAAGTTGTGGAAAATCACAGAAAAACTGTGTGGATTAAATACAGATGCTGATACA
GCATAAATATTACTTTTTATAAGAAAATCCCACCTGCATGTGCTAATTTATCAGTTGATG
GACATGTAAATTTTATATATTTTGCACTCATACCTAATGGTCTTTTTTTTGCGAGCAGTA
TTTAGTATTACAGTGGCAAATGGCCGCCAATGTGTTTAGTATTGTTGCAAAATGTGTCAG
GAAATACATTTAAATATTGCATTGCATTTTATATCTTTAGGCATATCACAATTTTTCCAT
ATACTGTCATAATGAATATAATACTATTTGCATTCTTTTTTTATATACAACTTATTAATT
CTTAACAG

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[20-154] 9.55E-37
Pfam	SDR_fam (IPR002347) - T[26-152] 3.6E-22
PRINTS	SDR_fam (IPR002347) - T[27-44] 3.7E-9 - T[103-114] 3.7E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	55.906 %	146	8.04E-44
RDH13_HUMAN	55.862 %	146	9.64E-44
RDH12_HUMAN	55.645 %	141	6.87E-42