- Transcript 'KH2012:KH.C2.106.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.106.v1.A.nonSL2-1
Possible name(s)
SEPSECS
Gene model
Location
KhC2 [6,379,128 / 6,384,484]
Amino acid sequence
Length: 477
>KH.C2.106.v1.A.nonSL2-1
IAQGQQFRTTRSNMVRILLEKQKVPEEGWEEEMIEFLLGELSQLDSNNALGNCGAGEREG
RIFSSLVARRNYRLAHGVGRSGDVTAVQPKAIGSSILNKLCTKLMLDMIRIVGARNAKSC
IIVPMATGMTLLLCFLALRSLRPNAKYIIWPRIDQKSCFKSMTSSGFEPIIIENKLEGDE
LRTDVSGILEAIKRVGADNVLCVHSTTSCFAPRVPDRLEEISLICKEHDIPHIVNNAYGL
QSSKCMHLLQQASRVGRVDAFVQSCDKNFLVPVGGAIVASFNNDSFLDKVASTYAGRASS
APAIDLLITMLNMGVVGMKKLLAERKENYSYLKQELTKLAAKHDEKLLETSHNPISMAMT
LSSLEASNCDVTQLGSMLFTRRVTGARVVQTFAKKEIEGHVFTGYGSHSNHYPHSYVTVA
AAIGMRRTECDVIVKCIDKCMTSLKKKKSNAVGQNLTENNETNDATNLDVINDDVTN
Nucleotide sequence
Length: 2,125
>KH2012:KH.C2.106.v1.A.nonSL2-1
ATATCGCTCAAGGGCAACAGTTCCGTACAACAAGAAGCAATATGGTTAGAATCTTGTTGG
AAAAACAAAAAGTTCCTGAAGAAGGATGGGAAGAAGAGATGATTGAATTCTTGTTGGGGG
AGTTGTCACAACTGGACAGCAATAATGCTTTGGGAAACTGTGGAGCGGGTGAAAGAGAAG
GAAGGATATTTTCATCTCTTGTTGCAAGGAGGAATTATAGACTAGCGCACGGGGTAGGAC
GCTCTGGTGATGTTACAGCTGTTCAACCAAAAGCAATCGGATCCAGCATACTAAACAAAC
TATGCACTAAGTTAATGTTGGATATGATAAGAATTGTGGGAGCAAGAAATGCAAAATCAT
GTATTATTGTTCCTATGGCAACAGGGATGACTTTGCTTTTATGTTTCCTTGCACTTCGTT
CGTTACGACCCAATGCAAAGTATATCATATGGCCGAGGATTGATCAGAAATCTTGTTTTA
AATCGATGACATCATCAGGATTTGAACCAATTATCATTGAGAACAAATTGGAGGGTGACG
AGCTACGGACCGATGTTTCCGGAATATTAGAGGCAATCAAGCGTGTCGGAGCGGATAACG
TCCTCTGTGTTCATTCAACCACATCATGCTTTGCTCCGAGAGTTCCTGACAGACTAGAAG
AAATCTCATTGATATGCAAAGAACATGACATACCTCATATAGTGAACAATGCTTATGGAC
TACAGTCATCTAAATGTATGCATTTACTACAACAGGCATCACGTGTTGGGAGGGTTGACG
CGTTTGTTCAAAGTTGCGACAAAAACTTCCTTGTCCCAGTAGGTGGCGCTATAGTGGCCT
CATTCAACAACGATAGTTTTCTCGATAAAGTAGCGTCCACATATGCAGGCCGAGCATCAT
CAGCTCCGGCCATTGACTTGTTGATAACAATGCTTAACATGGGGGTGGTGGGGATGAAGA
AGTTGCTTGCTGAAAGAAAGGAAAATTACAGCTACCTAAAACAAGAACTTACAAAGCTCG
CAGCAAAACACGATGAAAAATTACTGGAGACAAGTCATAATCCAATCTCTATGGCTATGA
CATTATCGAGCTTAGAAGCAAGTAATTGTGACGTCACACAACTCGGATCCATGCTGTTTA
CACGACGCGTAACTGGCGCGAGAGTCGTTCAAACTTTCGCAAAAAAAGAGATCGAAGGTC
ACGTGTTCACCGGGTATGGTTCCCATAGCAACCATTACCCTCATTCTTACGTCACAGTGG
CAGCTGCGATCGGTATGAGACGAACCGAGTGTGACGTCATAGTGAAGTGCATCGACAAGT
GCATGACGTCATTAAAAAAGAAAAAATCAAACGCGGTTGGTCAAAATTTAACTGAAAACA
ACGAAACTAATGACGCCACGAATCTTGACGTAATTAACGATGACGTCACCAATTGAAATC
ATGCAATAAAATCGTTTATTTTATTTTTAAAATAATTCATTACGCGCTTACAGTAGAAGG
TATGCAATAAACGTGAAATAATGAACATTGTTTTAACACCATGACGTAACAGTAGGATAC
CGATATAGTGATTCCGCGTAATCCGGTTGCTGAGTAAAAATATGAACATAAAACTTAGAA
TTTCACCACTAACTCATAGTCTGGTTACGTCAGCAATGAACTTTATAGACAATCCCCTTA
ATAAAAGTCGTGTTTTTGCTAAGTTGTTTTGTTTGGGTTTTCACCAAAACACATTCTGCA
TGGCGCAACGCCTTGTTTATGAACTTACGATGGCAATGTGGGGAAAGATGGGTTCCAATT
GCTGATTGTGTTTTATTTTTAACAAACCACGGTCGTTTAGAGTCGCGAGTATGTAGTTAT
AGTAGGGTGGGAGAAGACGGGACATCTGTACCGCACACACCATCCAAATAATCAGCCCGT
GTTTTAAACAAAACAACGGTCTATGTGCGTCGTGAGGATACATTTTTTTTAATATTCTTT
GTTTACCACCAAATGAGATGTGTAAAGAGAATAAAAAGGTGTCTCATCTTCCCGTACCCC
ACTATTATTCTGTATTTTTATTCTTTGTTTACTACCAAGTGGTACGCGAACAAAGAATCA
AATCAATTAAATTTAATTTATCGTA
| PIRSF |
Sec-tRNA_Se_transferase (IPR019872) - T[1-470] 6.1E-195 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[1-446] 1.9E-196 |
| TIGRFAM |
Sec-tRNA_Se_transferase (IPR019872) - T[2-440] 1.1E-188 |
| PANTHER |
Sec-tRNA_Se_transferase (IPR019872) - T[2-454] 2.3E-204 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[10-448] 9.65E-120 |
| Pfam |
SepSecS/SepCysS (IPR008829) - T[45-441] 2.3E-148 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPCS_HUMAN | 57.328 % | 593 | 0 |