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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Cisavi.CG.ENS81.R107...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S7...' > 
  5. Transcript 'KH2012:KH.C2.1098.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1098.v1.A.SL1-1

Possible name(s)

UFD1

Gene model

KH2012:KH.C2.1098

Location

KhC2 [1,347,254 / 1,348,654]

Sequences

Amino acid sequence

Length: 325

>KH.C2.1098.v1.A.SL1-1
APKLNKGITTMLQDFLNEFNMGARRPNTFSNGYRCYSSSFGALSDQKSKDIQKGGKIIMP
PSALDQLSRLNISYPMLFKLTNSPKGRSTHCGVLEFVAEEGVIYLPYWMMQNLLLGEGDL
VQLENCTLPVATYARFQPQSTDFHDISNPKAVLENALRNFACLTKSDMIAIQYNSRQYEL
CVQEVRPQNAVCIIECDISLEFDAPVGYEPPVPKPKQVESDMIVGTPDMKKAIEEYMKET
SGFSAFEGTGNRLDGKKKRTRQKKVEIDVSNIERGVPNYKWKFGQLTFIRNNEPKKQTAD
TDTSNDFAVFSGTGQKIRKKKSKNN

Nucleotide sequence

Length: 1,400

>KH2012:KH.C2.1098.v1.A.SL1-1
ATAAATTATACAATAGCTGTTAAATAATTAAGCACCTAAGTTAAATAAAGGTATAACTAC
TATGTTGCAAGACTTTCTAAATGAGTTCAACATGGGGGCCAGACGGCCCAATACCTTCAG
TAATGGCTACAGATGTTACTCCAGCAGCTTTGGGGCACTGTCTGATCAAAAAAGTAAAGA
TATACAAAAAGGGGGTAAGATTATTATGCCGCCTTCAGCTCTTGATCAACTGAGTCGGTT
AAATATCTCTTATCCAATGTTGTTTAAGCTTACCAACTCACCCAAGGGTAGATCAACTCA
TTGTGGTGTGCTCGAGTTTGTTGCAGAAGAGGGAGTCATTTATCTTCCTTATTGGATGAT
GCAGAACTTACTCCTTGGAGAAGGAGATCTTGTTCAGCTGGAAAATTGCACTTTACCAGT
CGCCACATACGCTCGCTTTCAACCACAATCCACTGACTTTCATGATATTTCCAATCCAAA
AGCTGTACTGGAAAATGCACTTCGTAACTTTGCTTGTTTGACTAAATCGGACATGATTGC
AATCCAGTACAATAGTCGACAGTATGAACTTTGTGTGCAGGAGGTTCGGCCCCAGAATGC
TGTTTGCATCATTGAGTGTGATATCAGTTTGGAGTTTGATGCTCCCGTTGGTTATGAGCC
ACCAGTACCAAAGCCAAAACAGGTGGAGTCTGATATGATAGTTGGGACACCAGATATGAA
AAAAGCAATAGAGGAGTACATGAAAGAGACAAGTGGCTTCTCTGCATTTGAAGGAACTGG
GAATCGCTTGGATGGGAAGAAGAAAAGGACGAGGCAGAAGAAAGTTGAGATTGATGTGAG
CAACATCGAACGTGGTGTTCCAAATTATAAGTGGAAGTTTGGACAATTGACTTTTATTCG
TAATAATGAACCAAAAAAGCAAACAGCTGACACTGATACGTCAAATGATTTTGCAGTCTT
TAGTGGCACCGGACAAAAGATAAGAAAAAAGAAAAGCAAAAACAATTAAATATTTTAAAT
ATATATGTACTGAATAAATCCTGAAAGTTCTATAATTTATATATTCACCCTTCTGCATGT
ATGGAATAAACAGTAGGTGTGCAATCTACACACTTAACCATGTTAACATGGGTATATTAA
GGTTAAAAACAACGTACTTTAATGTATCTAAATACATAGCGGTTAGTTAGTTTCCAATTC
ATTTTTAAATGTACAAATTCTGTGTTTTGTTGCAATATTGCCTATATGTTTGTGTTTCAA
CAGTTGCTTATATCTTATGGCTGGTTCTAAGTGGTTATCTTCATAGTTTGTTAACTCTCT
TAGTTTCCTAAAATTGACATAATGTCACAGTTTTATTTACAAATACTCTGGATTCTTATT
TCCTGTATTAAAATTTACAG

InterProScan

PANTHER
Ufd1-like (IPR004854) - T[22-264] 1.5E-99 - T[290-324] 1.5E-99
Pfam
Ufd1-like (IPR004854) - T[29-205] 1.1E-74

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UFD1_HUMAN 57.718 % 335 3.89E-115