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TRANSCRIPT CARD

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  1. Region 'REG00001087' > 
  2. Transcript 'KH2012:KH.C2.331.v1....' > 
  3. Transcript 'KH2012:KH.C2.331.v1....' > 
  4. Transcript 'KH2012:KH.C2.1102.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1102.v1.A.ND1-1

Possible name(s)

NAXD

Gene model

KH2012:KH.C2.1102

Location

KhC2 [6,174,164 / 6,178,351]

Sequences

Amino acid sequence

Length: 379

>KH.C2.1102.v1.A.ND1-1
RISVSNYVRNVVNYRSNTKGMSTILFYTRALIIGATKSQGVFGKTGSLVANISSNRGIIS
IVPRTNQPQKLLKMQEEENSLLEEARKVVPALSFGKHKGQAGRVGVIGGSEEYTGAPYFA
AISAMKAGADLAHVFCSKSASTVIKSYSPELIVHPLLDVPNAVTLLDEWLPRIHSHVIGP
GLGRVDATLNTVKEILIKLKKQEIPIVIDADGLFLITRDPSIIHGYTKAILTPNVVEFQR
LSKAMNLNWESKDLNGSIMETVDLSKALGGVTIVRKGEVDIVAAGDEVVTMDEIGSPRRC
GGQGDLLSGVMALFSYWTHNSTCTPPPTLLAGYAACFLTKRCANQAFQKHGRSTATTDLI
SEINSVFVNNFENPTDPKS

Nucleotide sequence

Length: 1,677

>KH2012:KH.C2.1102.v1.A.ND1-1
CATGTATGCAAGGAATTTTGTTATTACTTCGTTAGCGAATTAGCGTTTCGAATTATGTTC
GAAATGTGGTGAATTATCGGTCAAATACTAAAGGAATGAGCACAATTTTGTTCTATACTC
GTGCGTTGATAATTGGGGCAACGAAAAGTCAAGGTGTTTTCGGAAAAACTGGCTCTTTAG
TCGCAAATATTTCAAGTAACAGAGGAATTATAAGCATTGTTCCACGAACAAACCAACCAC
AGAAACTTTTAAAAATGCAAGAAGAAGAGAATTCTTTACTGGAAGAAGCAAGAAAAGTTG
TTCCTGCTTTATCGTTTGGGAAACACAAAGGACAAGCTGGTCGTGTTGGGGTTATTGGTG
GCAGTGAAGAATATACCGGCGCTCCGTACTTTGCTGCTATCAGTGCAATGAAAGCAGGTG
CCGACCTTGCTCATGTGTTTTGTTCCAAATCAGCTTCTACAGTCATTAAATCTTACAGTC
CAGAACTAATAGTTCATCCTTTACTAGACGTACCTAATGCTGTCACATTATTGGATGAAT
GGTTGCCAAGAATACACTCGCATGTGATTGGTCCAGGTCTGGGCAGAGTGGATGCAACAC
TTAACACAGTGAAAGAAATTTTAATTAAACTGAAAAAACAAGAAATTCCAATAGTTATAG
ACGCTGACGGGTTGTTTCTGATCACAAGAGACCCAAGCATAATACATGGATACACAAAAG
CTATTCTTACACCTAATGTTGTGGAGTTTCAAAGATTATCAAAAGCTATGAACTTAAATT
GGGAAAGTAAGGACTTGAACGGATCGATCATGGAAACTGTGGATTTAAGTAAAGCATTGG
GAGGTGTAACTATTGTTAGGAAGGGTGAGGTTGACATTGTCGCGGCAGGAGATGAAGTTG
TAACGATGGATGAGATAGGCAGTCCACGTAGATGTGGAGGGCAGGGAGATCTTTTATCAG
GAGTTATGGCTTTGTTTTCATATTGGACACACAACAGTACCTGCACCCCTCCACCCACCT
TACTTGCTGGTTATGCTGCTTGTTTCCTCACGAAACGCTGCGCAAATCAAGCGTTTCAAA
AACATGGTCGCTCCACAGCTACAACTGACTTGATTTCAGAAATAAATTCAGTTTTCGTGA
ATAATTTCGAGAACCCAACAGATCCTAAATCATAGTTCGACAAAGGATTAAAAAATAAAA
TTTTTGTAGGAAATTCAAGGCTCATTTCAAACGTCACCCACCAGATTTTTTTCTGAAACT
GATTTATTATTTGTAGTACGGTTGTGATAAACTGTTATCCCAGATTGCAAAACATTTGTT
TGCATTGTTATCCGAACTCATAACCACGAAAGCTCTGGTTTAGGAATAATTACACTGTGT
GTTAATTTATATTTATTTTTAATCATTTTTCAGTTGACTTTATGCTGTAAAGTTTTAACC
AGGGACCACGGTCTAATATAGACATCTCTAGTAGGCTATGCTGGGACCTATATTCTGCCT
AATATATATTAGAATCATATAAACAATGCACAGCATTGAACTGCCACACACATTAGTTAA
CAGTGTATGTTTCATGTGTATCGAGGTTTTACATCACTACAATGCTATACTGTCTTCATC
GTTTTAATAATATCACTTTCATGCTCGCAGAGTTAAAAATAAACGTATATTACCTAA

InterProScan

ProSiteProfiles
CARKD (IPR000631) - T[81-370] 64.966
Hamap
CARKD (IPR000631) - T[81-372] 30.828
TIGRFAM
CARKD (IPR000631) - T[82-366] 1.2E-54
Gene3D
Ribokinase-like (IPR029056) - T[82-370] 4.7E-79
SUPERFAMILY
Ribokinase-like (IPR029056) - T[83-367] 1.46E-56
CDD
CARKD (IPR000631) - T[97-363] 4.57907E-91
Pfam
CARKD (IPR000631) - T[104-363] 1.7E-56

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NNRD_HUMAN 52.516 % 340 9.56E-116