- Transcript 'Boleac.CG.SB_v3.S39....' >
- Transcript 'KH2012:KH.C2.1107.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1107.v1.A.nonSL1-1
Possible name(s)
CXXC1; DIDO1; PHF2
Gene model
Location
KhC2 [6,699,416 / 6,701,338]
Amino acid sequence
Length: 593
>KH.C2.1107.v1.A.nonSL1-1
LNVSAYLNKMEEDATEYCICRSSDIDRFMIMCDECEEWFHGDCIKISEKEARYIKYFYCK
TCQGKNPLLKIKYRKSKKKEEKDKERKRLKEKIKKKKLKAKKESKQIPPVQKSFSAPNLQ
EKGGKYEKDEAWTPKAPIRKTSVHEVQPLIKIHSSEDEPDLSPERTLFKKEFDPYSVDPD
ADNMKLNLNGCGKCENCQRKADCGMCDTCFDRSKYGSQSKAQKCRLRRCLDDRFSGNVKQ
KQSKESLKRQADLAFEENRKKHEKKIKKEKKEKRKQQSMYATANETNEFDYDMKRQCIGP
RCTKPALVTSKYCSHECGRLLARNRLLQILPQRIQEWNGTPTVANDNGRQELDRIRKRMI
NARTELQALEQKFHRLETIISTGRSLTVVEKLDNDDESEGEMDQSIYCVVCGHSVSIKNA
IKHMDKCYIKIESQMSFGSVYPTRIEGSQRLFCDVYNEQQQTYCKRLQVLCPEHTKEPKV
PETEVCGCPLTCDIYGTELPTKPNHFCRAAKRKCTRHFKWETMYRAEVDLQRIRQWLKID
EIFDEERRIKTAMSNRAGLVSLLLHQTTVHDPNCLDMRTKPTVTKKPAYRLMI
Nucleotide sequence
Length: 1,922
>KH2012:KH.C2.1107.v1.A.nonSL1-1
ATATTTTGATACATTTTTAATTAAACGTGTCTGCGTATCTGAATAAGATGGAGGAAGACG
CTACGGAGTATTGCATATGCAGGTCAAGCGACATTGATCGTTTCATGATAATGTGCGACG
AATGCGAGGAATGGTTTCACGGGGATTGCATTAAAATAAGCGAGAAGGAAGCTCGCTATA
TAAAGTACTTCTACTGCAAGACTTGTCAAGGAAAAAACCCTCTACTTAAAATTAAATATA
GAAAGTCTAAAAAGAAAGAAGAGAAAGATAAAGAGAGAAAACGGCTAAAAGAAAAAATTA
AAAAGAAGAAGTTGAAAGCAAAGAAAGAATCAAAGCAAATTCCACCTGTTCAAAAGTCGT
TTTCCGCTCCAAACCTGCAGGAAAAAGGAGGCAAATATGAAAAAGATGAAGCATGGACTC
CTAAAGCTCCAATCCGAAAAACCTCCGTTCATGAAGTTCAACCTTTGATAAAAATCCATT
CCTCCGAAGATGAACCCGATTTGTCTCCGGAGCGAACTTTGTTTAAAAAAGAGTTTGATC
CTTATTCTGTAGACCCTGATGCAGATAATATGAAGCTGAACTTGAATGGGTGTGGAAAAT
GTGAAAATTGCCAAAGGAAAGCAGATTGTGGGATGTGTGATACTTGTTTTGATCGGAGTA
AGTACGGTTCTCAAAGCAAAGCACAGAAGTGTCGACTTCGAAGATGTTTAGACGACAGAT
TCAGTGGTAATGTTAAGCAGAAACAAAGTAAAGAATCTTTAAAAAGACAAGCTGATCTTG
CTTTCGAAGAAAATCGAAAAAAGCACGAAAAGAAAATAAAAAAGGAAAAAAAAGAGAAAA
GAAAACAACAGTCAATGTATGCAACGGCGAATGAAACGAATGAGTTTGATTACGACATGA
AGCGACAGTGTATAGGACCCAGATGCACCAAACCTGCGCTTGTAACATCAAAGTATTGCA
GCCATGAGTGTGGGAGACTGTTGGCTCGAAATAGATTGCTACAAATTCTTCCACAAAGGA
TACAGGAGTGGAACGGAACTCCCACAGTTGCCAATGATAACGGGAGGCAAGAGTTAGATC
GGATCAGGAAGAGAATGATCAACGCAAGGACTGAACTCCAAGCACTGGAGCAGAAGTTTC
ATCGTTTAGAGACGATTATAAGTACTGGGAGAAGTTTGACTGTGGTTGAAAAACTCGATA
ATGATGATGAAAGTGAGGGGGAGATGGATCAGTCAATATACTGTGTTGTGTGTGGGCATT
CTGTGAGCATAAAGAATGCTATTAAGCATATGGACAAGTGCTACATCAAGATTGAATCTC
AAATGTCATTCGGTTCGGTTTACCCAACGAGAATCGAAGGTTCCCAGAGACTGTTTTGTG
ATGTTTACAACGAACAACAACAAACTTATTGTAAGCGTTTACAAGTTCTCTGTCCTGAGC
ACACGAAAGAGCCAAAGGTTCCGGAGACAGAAGTGTGTGGATGCCCATTGACGTGTGATA
TCTATGGCACTGAATTGCCCACAAAACCAAATCACTTTTGCCGGGCTGCAAAACGAAAAT
GCACACGTCATTTTAAATGGGAGACAATGTACAGGGCAGAGGTTGACCTGCAGAGGATAC
GGCAATGGTTGAAGATTGATGAAATATTTGATGAAGAAAGAAGAATTAAGACAGCTATGT
CCAACAGAGCAGGACTTGTCTCACTTCTTCTCCATCAAACAACGGTACATGACCCAAACT
GCTTAGATATGAGGACCAAACCTACAGTTACCAAGAAACCTGCTTACAGACTCATGATAT
AAACTTATTTTTCATACATTTTTCAGTGTTGCAATTTATACCTGCGTTAAAAAGGTCGAA
CTTTCCGGGTAAAACAGTCGTATGTGAAATGTTTTGAATTAAAACTTTGTTTCATTGTTT
AG
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[11-74] 5.54E-16 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[15-65] 8.929 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[17-64] 1.2E-10 |
| SMART |
Znf_PHD (IPR001965) - T[17-63] 3.7E-9 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[18-62] . |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[182-230] 12.365 |
| Pfam |
Znf_CXXC (IPR002857) - T[189-229] 1.1E-9 |
| Pfam |
CpG-bd_C (IPR022056) - T[322-563] 1.2E-94 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXXC1_HUMAN | 50.485 % | 340 | 1.14E-108 |