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  1. Region 'REG00000093'
  2. Region 'REG00000657'
  3. Transcript 'KH2012:KH.C2.1107.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1107.v1.A.nonSL7-1

Possible name(s)

CXXC1; DIDO1; PHF2

Location

KhC2 [6,699,416 / 6,701,357]

Sequences

Amino acid sequence

Length: 593

>KH.C2.1107.v1.A.nonSL7-1
LNVSAYLNKMEEDATEYCICRSSDIDRFMIMCDECEEWFHGDCIKISEKEARYIKYFYCK
TCQGKNPLLKIKYRKSKKKEEKDKERKRLKEKIKKKKLKAKKESKQIPPVQKSFSAPNLQ
EKGGKYEKDEAWTPKAPIRKTSVHEVQPLIKIHSSEDEPDLSPERTLFKKEFDPYSVDPD
ADNMKLNLNGCGKCENCQRKADCGMCDTCFDRSKYGSQSKAQKCRLRRCLDDRFSGNVKQ
KQSKESLKRQADLAFEENRKKHEKKIKKEKKEKRKQQSMYATANETNEFDYDMKRQCIGP
RCTKPALVTSKYCSHECGRLLARNRLLQILPQRIQEWNGTPTVANDNGRQELDRIRKRMI
NARTELQALEQKFHRLETIISTGRSLTVVEKLDNDDESEGEMDQSIYCVVCGHSVSIKNA
IKHMDKCYIKIESQMSFGSVYPTRIEGSQRLFCDVYNEQQQTYCKRLQVLCPEHTKEPKV
PETEVCGCPLTCDIYGTELPTKPNHFCRAAKRKCTRHFKWETMYRAEVDLQRIRQWLKID
EIFDEERRIKTAMSNRAGLVSLLLHQTTVHDPNCLDMRTKPTVTKKPAYRLMI

Nucleotide sequence

Length: 1,941

>KH2012:KH.C2.1107.v1.A.nonSL7-1
AAACTTTTCAGAAGTTTTCATATTTTGATACATTTTTAATTAAACGTGTCTGCGTATCTG
AATAAGATGGAGGAAGACGCTACGGAGTATTGCATATGCAGGTCAAGCGACATTGATCGT
TTCATGATAATGTGCGACGAATGCGAGGAATGGTTTCACGGGGATTGCATTAAAATAAGC
GAGAAGGAAGCTCGCTATATAAAGTACTTCTACTGCAAGACTTGTCAAGGAAAAAACCCT
CTACTTAAAATTAAATATAGAAAGTCTAAAAAGAAAGAAGAGAAAGATAAAGAGAGAAAA
CGGCTAAAAGAAAAAATTAAAAAGAAGAAGTTGAAAGCAAAGAAAGAATCAAAGCAAATT
CCACCTGTTCAAAAGTCGTTTTCCGCTCCAAACCTGCAGGAAAAAGGAGGCAAATATGAA
AAAGATGAAGCATGGACTCCTAAAGCTCCAATCCGAAAAACCTCCGTTCATGAAGTTCAA
CCTTTGATAAAAATCCATTCCTCCGAAGATGAACCCGATTTGTCTCCGGAGCGAACTTTG
TTTAAAAAAGAGTTTGATCCTTATTCTGTAGACCCTGATGCAGATAATATGAAGCTGAAC
TTGAATGGGTGTGGAAAATGTGAAAATTGCCAAAGGAAAGCAGATTGTGGGATGTGTGAT
ACTTGTTTTGATCGGAGTAAGTACGGTTCTCAAAGCAAAGCACAGAAGTGTCGACTTCGA
AGATGTTTAGACGACAGATTCAGTGGTAATGTTAAGCAGAAACAAAGTAAAGAATCTTTA
AAAAGACAAGCTGATCTTGCTTTCGAAGAAAATCGAAAAAAGCACGAAAAGAAAATAAAA
AAGGAAAAAAAAGAGAAAAGAAAACAACAGTCAATGTATGCAACGGCGAATGAAACGAAT
GAGTTTGATTACGACATGAAGCGACAGTGTATAGGACCCAGATGCACCAAACCTGCGCTT
GTAACATCAAAGTATTGCAGCCATGAGTGTGGGAGACTGTTGGCTCGAAATAGATTGCTA
CAAATTCTTCCACAAAGGATACAGGAGTGGAACGGAACTCCCACAGTTGCCAATGATAAC
GGGAGGCAAGAGTTAGATCGGATCAGGAAGAGAATGATCAACGCAAGGACTGAACTCCAA
GCACTGGAGCAGAAGTTTCATCGTTTAGAGACGATTATAAGTACTGGGAGAAGTTTGACT
GTGGTTGAAAAACTCGATAATGATGATGAAAGTGAGGGGGAGATGGATCAGTCAATATAC
TGTGTTGTGTGTGGGCATTCTGTGAGCATAAAGAATGCTATTAAGCATATGGACAAGTGC
TACATCAAGATTGAATCTCAAATGTCATTCGGTTCGGTTTACCCAACGAGAATCGAAGGT
TCCCAGAGACTGTTTTGTGATGTTTACAACGAACAACAACAAACTTATTGTAAGCGTTTA
CAAGTTCTCTGTCCTGAGCACACGAAAGAGCCAAAGGTTCCGGAGACAGAAGTGTGTGGA
TGCCCATTGACGTGTGATATCTATGGCACTGAATTGCCCACAAAACCAAATCACTTTTGC
CGGGCTGCAAAACGAAAATGCACACGTCATTTTAAATGGGAGACAATGTACAGGGCAGAG
GTTGACCTGCAGAGGATACGGCAATGGTTGAAGATTGATGAAATATTTGATGAAGAAAGA
AGAATTAAGACAGCTATGTCCAACAGAGCAGGACTTGTCTCACTTCTTCTCCATCAAACA
ACGGTACATGACCCAAACTGCTTAGATATGAGGACCAAACCTACAGTTACCAAGAAACCT
GCTTACAGACTCATGATATAAACTTATTTTTCATACATTTTTCAGTGTTGCAATTTATAC
CTGCGTTAAAAAGGTCGAACTTTCCGGGTAAAACAGTCGTATGTGAAATGTTTTGAATTA
AAACTTTGTTTCATTGTTTAG

InterProScan

SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[11-74] 5.54E-16
ProSiteProfiles
Znf_PHD-finger (IPR019787) - T[15-65] 8.929
Pfam
Znf_PHD-finger (IPR019787) - T[17-64] 1.2E-10
SMART
Znf_PHD (IPR001965) - T[17-63] 3.7E-9
ProSitePatterns
Zinc_finger_PHD-type_CS (IPR019786) - T[18-62] .
ProSiteProfiles
Znf_CXXC (IPR002857) - T[182-230] 12.365
Pfam
Znf_CXXC (IPR002857) - T[189-229] 1.1E-9
Pfam
CpG-bd_C (IPR022056) - T[322-563] 1.2E-94

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CXXC1_HUMAN 50.485 % 340 1.14E-108





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