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- Clone 'cien114809' >
- Transcript 'KH2012:KH.C2.1107.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1107.v1.A.nonSL8-1
Possible name(s)
CXXC1; DIDO1; PHF2
Gene model
Location
KhC2 [6,699,416 / 6,701,326]
Amino acid sequence
Length: 593
>KH.C2.1107.v1.A.nonSL8-1
LNVSAYLNKMEEDATEYCICRSSDIDRFMIMCDECEEWFHGDCIKISEKEARYIKYFYCK
TCQGKNPLLKIKYRKSKKKEEKDKERKRLKEKIKKKKLKAKKESKQIPPVQKSFSAPNLQ
EKGGKYEKDEAWTPKAPIRKTSVHEVQPLIKIHSSEDEPDLSPERTLFKKEFDPYSVDPD
ADNMKLNLNGCGKCENCQRKADCGMCDTCFDRSKYGSQSKAQKCRLRRCLDDRFSGNVKQ
KQSKESLKRQADLAFEENRKKHEKKIKKEKKEKRKQQSMYATANETNEFDYDMKRQCIGP
RCTKPALVTSKYCSHECGRLLARNRLLQILPQRIQEWNGTPTVANDNGRQELDRIRKRMI
NARTELQALEQKFHRLETIISTGRSLTVVEKLDNDDESEGEMDQSIYCVVCGHSVSIKNA
IKHMDKCYIKIESQMSFGSVYPTRIEGSQRLFCDVYNEQQQTYCKRLQVLCPEHTKEPKV
PETEVCGCPLTCDIYGTELPTKPNHFCRAAKRKCTRHFKWETMYRAEVDLQRIRQWLKID
EIFDEERRIKTAMSNRAGLVSLLLHQTTVHDPNCLDMRTKPTVTKKPAYRLMI
Nucleotide sequence
Length: 1,910
>KH2012:KH.C2.1107.v1.A.nonSL8-1
ATTTTTAATTAAACGTGTCTGCGTATCTGAATAAGATGGAGGAAGACGCTACGGAGTATT
GCATATGCAGGTCAAGCGACATTGATCGTTTCATGATAATGTGCGACGAATGCGAGGAAT
GGTTTCACGGGGATTGCATTAAAATAAGCGAGAAGGAAGCTCGCTATATAAAGTACTTCT
ACTGCAAGACTTGTCAAGGAAAAAACCCTCTACTTAAAATTAAATATAGAAAGTCTAAAA
AGAAAGAAGAGAAAGATAAAGAGAGAAAACGGCTAAAAGAAAAAATTAAAAAGAAGAAGT
TGAAAGCAAAGAAAGAATCAAAGCAAATTCCACCTGTTCAAAAGTCGTTTTCCGCTCCAA
ACCTGCAGGAAAAAGGAGGCAAATATGAAAAAGATGAAGCATGGACTCCTAAAGCTCCAA
TCCGAAAAACCTCCGTTCATGAAGTTCAACCTTTGATAAAAATCCATTCCTCCGAAGATG
AACCCGATTTGTCTCCGGAGCGAACTTTGTTTAAAAAAGAGTTTGATCCTTATTCTGTAG
ACCCTGATGCAGATAATATGAAGCTGAACTTGAATGGGTGTGGAAAATGTGAAAATTGCC
AAAGGAAAGCAGATTGTGGGATGTGTGATACTTGTTTTGATCGGAGTAAGTACGGTTCTC
AAAGCAAAGCACAGAAGTGTCGACTTCGAAGATGTTTAGACGACAGATTCAGTGGTAATG
TTAAGCAGAAACAAAGTAAAGAATCTTTAAAAAGACAAGCTGATCTTGCTTTCGAAGAAA
ATCGAAAAAAGCACGAAAAGAAAATAAAAAAGGAAAAAAAAGAGAAAAGAAAACAACAGT
CAATGTATGCAACGGCGAATGAAACGAATGAGTTTGATTACGACATGAAGCGACAGTGTA
TAGGACCCAGATGCACCAAACCTGCGCTTGTAACATCAAAGTATTGCAGCCATGAGTGTG
GGAGACTGTTGGCTCGAAATAGATTGCTACAAATTCTTCCACAAAGGATACAGGAGTGGA
ACGGAACTCCCACAGTTGCCAATGATAACGGGAGGCAAGAGTTAGATCGGATCAGGAAGA
GAATGATCAACGCAAGGACTGAACTCCAAGCACTGGAGCAGAAGTTTCATCGTTTAGAGA
CGATTATAAGTACTGGGAGAAGTTTGACTGTGGTTGAAAAACTCGATAATGATGATGAAA
GTGAGGGGGAGATGGATCAGTCAATATACTGTGTTGTGTGTGGGCATTCTGTGAGCATAA
AGAATGCTATTAAGCATATGGACAAGTGCTACATCAAGATTGAATCTCAAATGTCATTCG
GTTCGGTTTACCCAACGAGAATCGAAGGTTCCCAGAGACTGTTTTGTGATGTTTACAACG
AACAACAACAAACTTATTGTAAGCGTTTACAAGTTCTCTGTCCTGAGCACACGAAAGAGC
CAAAGGTTCCGGAGACAGAAGTGTGTGGATGCCCATTGACGTGTGATATCTATGGCACTG
AATTGCCCACAAAACCAAATCACTTTTGCCGGGCTGCAAAACGAAAATGCACACGTCATT
TTAAATGGGAGACAATGTACAGGGCAGAGGTTGACCTGCAGAGGATACGGCAATGGTTGA
AGATTGATGAAATATTTGATGAAGAAAGAAGAATTAAGACAGCTATGTCCAACAGAGCAG
GACTTGTCTCACTTCTTCTCCATCAAACAACGGTACATGACCCAAACTGCTTAGATATGA
GGACCAAACCTACAGTTACCAAGAAACCTGCTTACAGACTCATGATATAAACTTATTTTT
CATACATTTTTCAGTGTTGCAATTTATACCTGCGTTAAAAAGGTCGAACTTTCCGGGTAA
AACAGTCGTATGTGAAATGTTTTGAATTAAAACTTTGTTTCATTGTTTAG
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[11-74] 5.54E-16 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[15-65] 8.929 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[17-64] 1.2E-10 |
| SMART |
Znf_PHD (IPR001965) - T[17-63] 3.7E-9 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[18-62] . |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[182-230] 12.365 |
| Pfam |
Znf_CXXC (IPR002857) - T[189-229] 1.1E-9 |
| Pfam |
CpG-bd_C (IPR022056) - T[322-563] 1.2E-94 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXXC1_HUMAN | 50.485 % | 340 | 1.14E-108 |