Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.15.v1.A.SL1-1

Possible name(s)

EXOSC1; EXOSC2

Gene model

KH2012:KH.C2.15

Location

KhC2 [424,098 / 424,890]

Sequences

Amino acid sequence

Length: 215

>KH.C2.15.v1.A.SL1-1
VRCYLIMEENSICIPGERLGSSEQYQPGKGTYVRHGFVFASIAGSIKKESDKSGNLPLIH
VQSIHTKQHIPQIGGIVICKMTQLTSAFAKCKIISVQGSNHTAAFRGIIRKEDVRATNRD
KVEIYKSFRPGDIVVARVLSLGDALCYLLSTAENELGVVVALSENGTAMIPLAHDQMQCP
ITLLKQFRKVARPQSKHISFPENSKSALTNESTVS

Nucleotide sequence

Length: 792

>KH2012:KH.C2.15.v1.A.SL1-1
ATTGTTCATTGTCGGTTTCTTTTTTGTGTGATGAGTTAGGTGTTATTTGATAATGGAGGA
GAATTCGATTTGTATTCCTGGTGAAAGACTTGGTAGCTCAGAACAATATCAACCTGGAAA
AGGAACTTATGTACGACATGGATTTGTATTTGCTTCCATTGCTGGAAGTATTAAAAAAGA
ATCTGATAAGTCTGGTAATCTACCATTAATCCATGTGCAATCAATTCATACCAAGCAACA
TATACCTCAGATTGGAGGAATAGTGATTTGTAAGATGACACAACTCACTTCAGCGTTTGC
CAAATGCAAAATCATTTCAGTTCAAGGAAGTAATCATACTGCTGCCTTTCGTGGAATTAT
TCGAAAAGAAGATGTGCGTGCAACAAACAGAGACAAAGTTGAAATTTATAAATCATTTCG
TCCTGGAGATATTGTGGTAGCAAGAGTTTTATCACTTGGTGATGCTTTGTGTTATCTTTT
AAGCACTGCTGAAAATGAACTTGGGGTGGTAGTTGCATTGAGTGAGAACGGAACAGCAAT
GATTCCACTTGCACACGATCAAATGCAGTGCCCGATAACACTGCTTAAGCAATTTCGTAA
AGTTGCGAGACCACAATCTAAACACATATCTTTTCCAGAAAATTCTAAAAGTGCATTGAC
TAATGAGTCTACTGTTTCTTGATAACCAATATTTTTGAATGTCCGTTGTATTTGTTAAAA
AATAGCCTATGCTGGGTGTCAGTAGGCTACGTATAAAGTTTGTGTATAAATAACATGCAA
CAATTTTTCAAG

InterProScan

Pfam	Exosome_cplx_N_dom (IPR025721) - T[12-46] 3.0E-14
SUPERFAMILY	NA-bd_OB-fold (IPR012340) - T[70-190] 1.13E-29
Pfam	EXOSC1 (IPR019495) - T[103-141] 3.1E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EXOS1_HUMAN	56.15 %	207	1.83E-68