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  1. Transcript 'KH2012:KH.C2.282.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.282.v1.A.ND1-1

Possible name(s)

DNAJC27; RAB21; RAB7A

Location

KhC2 [491,293 / 497,439]

Sequences

Amino acid sequence

Length: 290

>KH.C2.282.v1.A.ND1-1
WLDFQAQRVYPSPYNAKPVDEINMSHRKSQQKRMRVKIISMGNAEVGKSCIIKRYCERRF
VSKYLPTIGIDYGVTKVSVKDKEVKVNIFDMAGHPYFYEVRNEFYRDAQAALLVFDVCDR
NSYETLESWLLEMKQEMGRNNKMDNIVFFVCANKIDKGKRMVETLEAQLWAEEKGFKYFE
TSAATGDGITELFQALFSTLVEVSENGGRPIKVNTNLGFTKEQADAILRIKSGRDNYEKL
GLHHSATRDDINKAYRKLAVILHPDKNVAPGSEDAFKTLVNARTALLRNK

Nucleotide sequence

Length: 1,835

>KH2012:KH.C2.282.v1.A.ND1-1
GAAAGTAAGAATGAAACATGTAAGCTTACTTAAATGCTGTTAGCTCTGCTGTAATATTCC
AGTTTGGTTTAGAAGATCTTGGTAATGGTGGATCTGGTCCTTCTATTTCCTCTTTTCTTT
CCAAGGCAAGGTAGTAATGCTTCATCCACCGTGGTGGCATTACAGCAGATGGATTGACGG
GTTTAATGGCTGGATTTCCAGGCACAGAGAGTCTACCCGTCACCCTACAATGCTAAGCCT
GTAGACGAAATAAACATGAGTCACCGCAAAAGCCAACAGAAAAGAATGAGGGTGAAGATA
ATTAGCATGGGAAATGCTGAAGTGGGGAAGAGTTGCATTATAAAGCGATATTGTGAAAGA
AGATTTGTAAGCAAGTACCTTCCAACAATTGGCATTGACTACGGTGTTACAAAGGTTTCA
GTGAAAGACAAGGAAGTTAAAGTTAACATCTTCGATATGGCAGGCCATCCTTATTTTTAT
GAAGTTAGAAATGAATTTTACAGAGATGCTCAAGCTGCCTTATTGGTGTTTGATGTTTGT
GATCGAAACAGTTATGAAACGTTAGAGTCATGGTTGCTTGAAATGAAACAAGAAATGGGA
AGAAACAACAAAATGGACAACATTGTTTTTTTTGTTTGTGCCAACAAGATTGACAAGGGT
AAGCGTATGGTAGAAACACTAGAAGCTCAACTTTGGGCAGAAGAAAAAGGTTTTAAATAT
TTTGAAACTTCAGCAGCAACCGGGGATGGGATTACCGAATTGTTCCAGGCTCTGTTTTCC
ACATTGGTTGAAGTATCGGAAAATGGTGGACGGCCAATTAAAGTAAACACCAACCTTGGA
TTTACAAAGGAGCAAGCTGATGCAATATTAAGAATCAAGAGCGGAAGAGATAATTATGAG
AAGTTGGGTTTGCACCACAGTGCAACAAGGGATGACATAAACAAGGCATACAGGAAGTTG
GCGGTGATTCTGCATCCAGATAAAAATGTGGCCCCAGGGAGTGAGGATGCATTCAAGACT
CTTGTAAATGCAAGGACAGCTTTGTTAAGAAACAAATGATTTGTATACATTTTAGATTTT
AACATATTTTTTTACTATGGTTGTATTGTACATTGGTTAGTTCATAACCAAAATATGGGT
GCTTAAATCGTAACTGTGAGGCATATTTACAAACTAAACTTTTTTTAAGTATCATTTACC
TTGTGTTTTTTTTATAGCTGTAAAGTATAATAAAGTATTAAACTACTCTTTCCATATCAC
AGAAGCATGTTATCAGTTCCATCAGATAACTGGTTTCCATCTCCATGTATACTGCTTACA
TGTGGCAACCAAACCATACATCATCCAATACGATTTTTTGGTAATCATTTTTTTCGGTTA
CAAAAAGATATTTAGCAAATAAGAAGTATAAAACACACCATTTTTGTAAATCACTGACCA
CTTTCAGATTTTTTAAACTGCATGTAAAATTTATTTTTATTAATTGTTGTGGCTGTGGGG
TTACTTTTGGATTCTGTTGTAACTTGGTCAGTTTCAAGTTTTTGAGGTTTGTTAATGTTT
TGTCGAATTGGAGACCGACTTCTACTTCTTGCATGTGCACTACTACTGGAAGTTTCTTCC
TGCTGTAAACAGAATATATGGTAACTCTGTGTTAAGAAAAATTTTGTATAACAGTGTTTT
TACAAGGTTATTAATAATACTTTACTTTTTAAACTTTCTGCACTAAAATAAAGTAATGAA
ACTATTACTATAAATTCTGTGTCCGACAATTAGTTTGTGTACAAGCTTCAATTGAGAGAT
ATTGCGTGCATTAAATACCGCATGTGCCCTCCCCA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[31-201] 1.16E-45
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[36-196] 2.0E-24
Pfam
Small_GTPase (IPR001806) - T[37-200] 3.4E-41
Gene3D
J_dom_sf (IPR036869) - T[212-290] 4.7E-20
SUPERFAMILY
J_dom_sf (IPR036869) - T[222-287] 5.76E-17
SMART
DnaJ_domain (IPR001623) - T[234-290] 5.9E-9
ProSiteProfiles
DnaJ_domain (IPR001623) - T[235-290] 12.37
Pfam
DnaJ_domain (IPR001623) - T[236-286] 1.8E-12
PRINTS
DnaJ_domain (IPR001623) - T[237-255] 1.8E-8 - T[255-270] 1.8E-8 - T[271-290] 1.8E-8
CDD
DnaJ_domain (IPR001623) - T[237-282] 2.08836E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB21_HUMAN 32.941 % 110 4.29E-29
RAB7A_HUMAN 34.359 % 110 3.27E-29
DJC27_HUMAN 64.444 % 375 2.59E-132