- Transcript 'KH2012:KH.C2.282.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.282.v1.A.ND1-1
Possible name(s)
DNAJC27; RAB21; RAB7A
Gene model
Location
KhC2 [491,293 / 497,439]
Amino acid sequence
Length: 290
>KH.C2.282.v1.A.ND1-1
WLDFQAQRVYPSPYNAKPVDEINMSHRKSQQKRMRVKIISMGNAEVGKSCIIKRYCERRF
VSKYLPTIGIDYGVTKVSVKDKEVKVNIFDMAGHPYFYEVRNEFYRDAQAALLVFDVCDR
NSYETLESWLLEMKQEMGRNNKMDNIVFFVCANKIDKGKRMVETLEAQLWAEEKGFKYFE
TSAATGDGITELFQALFSTLVEVSENGGRPIKVNTNLGFTKEQADAILRIKSGRDNYEKL
GLHHSATRDDINKAYRKLAVILHPDKNVAPGSEDAFKTLVNARTALLRNK
Nucleotide sequence
Length: 1,835
>KH2012:KH.C2.282.v1.A.ND1-1
GAAAGTAAGAATGAAACATGTAAGCTTACTTAAATGCTGTTAGCTCTGCTGTAATATTCC
AGTTTGGTTTAGAAGATCTTGGTAATGGTGGATCTGGTCCTTCTATTTCCTCTTTTCTTT
CCAAGGCAAGGTAGTAATGCTTCATCCACCGTGGTGGCATTACAGCAGATGGATTGACGG
GTTTAATGGCTGGATTTCCAGGCACAGAGAGTCTACCCGTCACCCTACAATGCTAAGCCT
GTAGACGAAATAAACATGAGTCACCGCAAAAGCCAACAGAAAAGAATGAGGGTGAAGATA
ATTAGCATGGGAAATGCTGAAGTGGGGAAGAGTTGCATTATAAAGCGATATTGTGAAAGA
AGATTTGTAAGCAAGTACCTTCCAACAATTGGCATTGACTACGGTGTTACAAAGGTTTCA
GTGAAAGACAAGGAAGTTAAAGTTAACATCTTCGATATGGCAGGCCATCCTTATTTTTAT
GAAGTTAGAAATGAATTTTACAGAGATGCTCAAGCTGCCTTATTGGTGTTTGATGTTTGT
GATCGAAACAGTTATGAAACGTTAGAGTCATGGTTGCTTGAAATGAAACAAGAAATGGGA
AGAAACAACAAAATGGACAACATTGTTTTTTTTGTTTGTGCCAACAAGATTGACAAGGGT
AAGCGTATGGTAGAAACACTAGAAGCTCAACTTTGGGCAGAAGAAAAAGGTTTTAAATAT
TTTGAAACTTCAGCAGCAACCGGGGATGGGATTACCGAATTGTTCCAGGCTCTGTTTTCC
ACATTGGTTGAAGTATCGGAAAATGGTGGACGGCCAATTAAAGTAAACACCAACCTTGGA
TTTACAAAGGAGCAAGCTGATGCAATATTAAGAATCAAGAGCGGAAGAGATAATTATGAG
AAGTTGGGTTTGCACCACAGTGCAACAAGGGATGACATAAACAAGGCATACAGGAAGTTG
GCGGTGATTCTGCATCCAGATAAAAATGTGGCCCCAGGGAGTGAGGATGCATTCAAGACT
CTTGTAAATGCAAGGACAGCTTTGTTAAGAAACAAATGATTTGTATACATTTTAGATTTT
AACATATTTTTTTACTATGGTTGTATTGTACATTGGTTAGTTCATAACCAAAATATGGGT
GCTTAAATCGTAACTGTGAGGCATATTTACAAACTAAACTTTTTTTAAGTATCATTTACC
TTGTGTTTTTTTTATAGCTGTAAAGTATAATAAAGTATTAAACTACTCTTTCCATATCAC
AGAAGCATGTTATCAGTTCCATCAGATAACTGGTTTCCATCTCCATGTATACTGCTTACA
TGTGGCAACCAAACCATACATCATCCAATACGATTTTTTGGTAATCATTTTTTTCGGTTA
CAAAAAGATATTTAGCAAATAAGAAGTATAAAACACACCATTTTTGTAAATCACTGACCA
CTTTCAGATTTTTTAAACTGCATGTAAAATTTATTTTTATTAATTGTTGTGGCTGTGGGG
TTACTTTTGGATTCTGTTGTAACTTGGTCAGTTTCAAGTTTTTGAGGTTTGTTAATGTTT
TGTCGAATTGGAGACCGACTTCTACTTCTTGCATGTGCACTACTACTGGAAGTTTCTTCC
TGCTGTAAACAGAATATATGGTAACTCTGTGTTAAGAAAAATTTTGTATAACAGTGTTTT
TACAAGGTTATTAATAATACTTTACTTTTTAAACTTTCTGCACTAAAATAAAGTAATGAA
ACTATTACTATAAATTCTGTGTCCGACAATTAGTTTGTGTACAAGCTTCAATTGAGAGAT
ATTGCGTGCATTAAATACCGCATGTGCCCTCCCCA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[31-201] 1.16E-45 |
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[36-196] 2.0E-24 |
| Pfam |
Small_GTPase (IPR001806) - T[37-200] 3.4E-41 |
| Gene3D |
J_dom_sf (IPR036869) - T[212-290] 4.7E-20 |
| SUPERFAMILY |
J_dom_sf (IPR036869) - T[222-287] 5.76E-17 |
| SMART |
DnaJ_domain (IPR001623) - T[234-290] 5.9E-9 |
| ProSiteProfiles |
DnaJ_domain (IPR001623) - T[235-290] 12.37 |
| Pfam |
DnaJ_domain (IPR001623) - T[236-286] 1.8E-12 |
| PRINTS |
DnaJ_domain (IPR001623) - T[237-255] 1.8E-8 - T[255-270] 1.8E-8 - T[271-290] 1.8E-8 |
| CDD |
DnaJ_domain (IPR001623) - T[237-282] 2.08836E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RAB21_HUMAN | 32.941 % | 110 | 4.29E-29 |
| RAB7A_HUMAN | 34.359 % | 110 | 3.27E-29 |
| DJC27_HUMAN | 64.444 % | 375 | 2.59E-132 |