- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C12.696.v1...' >
- Transcript 'Boleac.CG.SB_v3.S500...' >
- Transcript 'KH2012:KH.C9.785.v2....' >
- Transcript 'KH2012:KH.C2.282.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.282.v2.A.ND1-1
Possible name(s)
DNAJC27; RAB21; RAB7A
Gene model
Location
KhC2 [491,293 / 497,439]
Amino acid sequence
Length: 288
>KH.C2.282.v2.A.ND1-1
TPTLLRVYPSPYNAKPVDEINMSHRKSQQKRMRVKIISMGNAEVGKSCIIKRYCERRFVS
KYLPTIGIDYGVTKVSVKDKEVKVNIFDMAGHPYFYEVRNEFYRDAQAALLVFDVCDRNS
YETLESWLLEMKQEMGRNNKMDNIVFFVCANKIDKGKRMVETLEAQLWAEEKGFKYFETS
AATGDGITELFQALFSTLVEVSENGGRPIKVNTNLGFTKEQADAILRIKSGRDNYEKLGL
HHSATRDDINKAYRKLAVILHPDKNVAPGSEDAFKTLVNARTALLRNK
Nucleotide sequence
Length: 1,917
>KH2012:KH.C2.282.v2.A.ND1-1
GAAAGTAAGAATGAAACATGTAAGCTTACTTAAATGCTGTTAGCTCTGCTGTAATATTCC
AGTTTGGTTTAGAAGATCTTGGTAATGGTGGATCTGGTCCTTCTATTTCCTCTTTTCTTT
CCAAGGCAAGGTAGTAATGCTTCATCCACCGTGGTGGCATTACAGCAGATGGATTGACGG
GTTTAATGGCTGGATTTCCAGGCACAGAGCAACAAACTTGTTTTACGTGAAAATATCTTT
GACAACAGTTCATTAAAGCCTCAATAGCCGCTGAACACCTACCCTCCTGAGAGTCTACCC
GTCACCCTACAATGCTAAGCCTGTAGACGAAATAAACATGAGTCACCGCAAAAGCCAACA
GAAAAGAATGAGGGTGAAGATAATTAGCATGGGAAATGCTGAAGTGGGGAAGAGTTGCAT
TATAAAGCGATATTGTGAAAGAAGATTTGTAAGCAAGTACCTTCCAACAATTGGCATTGA
CTACGGTGTTACAAAGGTTTCAGTGAAAGACAAGGAAGTTAAAGTTAACATCTTCGATAT
GGCAGGCCATCCTTATTTTTATGAAGTTAGAAATGAATTTTACAGAGATGCTCAAGCTGC
CTTATTGGTGTTTGATGTTTGTGATCGAAACAGTTATGAAACGTTAGAGTCATGGTTGCT
TGAAATGAAACAAGAAATGGGAAGAAACAACAAAATGGACAACATTGTTTTTTTTGTTTG
TGCCAACAAGATTGACAAGGGTAAGCGTATGGTAGAAACACTAGAAGCTCAACTTTGGGC
AGAAGAAAAAGGTTTTAAATATTTTGAAACTTCAGCAGCAACCGGGGATGGGATTACCGA
ATTGTTCCAGGCTCTGTTTTCCACATTGGTTGAAGTATCGGAAAATGGTGGACGGCCAAT
TAAAGTAAACACCAACCTTGGATTTACAAAGGAGCAAGCTGATGCAATATTAAGAATCAA
GAGCGGAAGAGATAATTATGAGAAGTTGGGTTTGCACCACAGTGCAACAAGGGATGACAT
AAACAAGGCATACAGGAAGTTGGCGGTGATTCTGCATCCAGATAAAAATGTGGCCCCAGG
GAGTGAGGATGCATTCAAGACTCTTGTAAATGCAAGGACAGCTTTGTTAAGAAACAAATG
ATTTGTATACATTTTAGATTTTAACATATTTTTTTACTATGGTTGTATTGTACATTGGTT
AGTTCATAACCAAAATATGGGTGCTTAAATCGTAACTGTGAGGCATATTTACAAACTAAA
CTTTTTTTAAGTATCATTTACCTTGTGTTTTTTTTATAGCTGTAAAGTATAATAAAGTAT
TAAACTACTCTTTCCATATCACAGAAGCATGTTATCAGTTCCATCAGATAACTGGTTTCC
ATCTCCATGTATACTGCTTACATGTGGCAACCAAACCATACATCATCCAATACGATTTTT
TGGTAATCATTTTTTTCGGTTACAAAAAGATATTTAGCAAATAAGAAGTATAAAACACAC
CATTTTTGTAAATCACTGACCACTTTCAGATTTTTTAAACTGCATGTAAAATTTATTTTT
ATTAATTGTTGTGGCTGTGGGGTTACTTTTGGATTCTGTTGTAACTTGGTCAGTTTCAAG
TTTTTGAGGTTTGTTAATGTTTTGTCGAATTGGAGACCGACTTCTACTTCTTGCATGTGC
ACTACTACTGGAAGTTTCTTCCTGCTGTAAACAGAATATATGGTAACTCTGTGTTAAGAA
AAATTTTGTATAACAGTGTTTTTACAAGGTTATTAATAATACTTTACTTTTTAAACTTTC
TGCACTAAAATAAAGTAATGAAACTATTACTATAAATTCTGTGTCCGACAATTAGTTTGT
GTACAAGCTTCAATTGAGAGATATTGCGTGCATTAAATACCGCATGTGCCCTCCCCA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[29-199] 1.16E-45 |
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[34-194] 2.0E-24 |
| Pfam |
Small_GTPase (IPR001806) - T[35-198] 3.4E-41 |
| Gene3D |
J_dom_sf (IPR036869) - T[210-288] 4.7E-20 |
| SUPERFAMILY |
J_dom_sf (IPR036869) - T[220-285] 5.76E-17 |
| SMART |
DnaJ_domain (IPR001623) - T[232-288] 5.9E-9 |
| ProSiteProfiles |
DnaJ_domain (IPR001623) - T[233-288] 12.37 |
| Pfam |
DnaJ_domain (IPR001623) - T[234-284] 1.8E-12 |
| CDD |
DnaJ_domain (IPR001623) - T[235-280] 1.74944E-12 |
| PRINTS |
DnaJ_domain (IPR001623) - T[235-253] 1.8E-8 - T[253-268] 1.8E-8 - T[269-288] 1.8E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RAB13_HUMAN | 31.667 % | 109 | 3.64E-29 |
| RAB7A_HUMAN | 34.359 % | 110 | 3.19E-29 |
| DJC27_HUMAN | 64.444 % | 376 | 1.0E-132 |