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  1. Transcript 'KH2012:KH.C2.414.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.414.v1.A.ND1-1

Possible name(s)

RPAP2

Location

KhC2 [1,396,931 / 1,398,637]

Sequences

Amino acid sequence

Length: 474

>KH.C2.414.v1.A.ND1-1
HLLCLAQFTDSPISFEFTNMSDTSTKNKQKFDKKVLADARKKLLAEKRAQAIVEQLLESN
VSEDLFQKSVYYLSVDRYADVVEERSITKICGYPLCSNSLKNIPRQQYKISNNVVYDITE
RKKFCSNFCYQSSKYIQEQIPTYPLWLRESDDKVRITLLKIGSGSKGEKVDLLHFVQPSD
AEMESEFQDESQADATHNSSTDNNCREVRESRKKTTRIKLCDPTKSPGLVTRCNEKIKVD
LDELVGLFGEWVTRKTLVRLKLLPEDDTHVDVAPVDANEQRRAAKLKLLEERMNKIAGGK
QIQEKQPLPSYEEVNEYGQRVEQYFRGQFTAVQGRHVMKPNKKKSDEEEDTTSQHVVPTV
DSKNQLSIRKRILMEKFSKSLSTIDSTMHNPAILQDIRCVVDTFNLTSKNVMLKPDQLVV
VTLMILELLQRSSSFSNTLLSSSVSAFLKTISLEIEEIKTAVEHIVEKIVSRPP

Nucleotide sequence

Length: 1,706

>KH2012:KH.C2.414.v1.A.ND1-1
AACTTATTGACCAATTTTATCATAATATTAACCATCTACAATTACGCATGCACATTTTGA
GTAATCCACAGCACTAAAGGCGTATCTATTTAGTTAAATGCATGTATAAACAACTAAAAT
ACCATAACTTTGTCGTTTTGCGCACTTTCTGTATACAACATTCGTTTATTTTAAATAACG
AAGTTATAGCACTTGTTGTGTTTAGCACAGTTCACTGATTCTCCGATTTCATTTGAGTTT
ACAAATATGAGCGATACTTCTACCAAAAATAAGCAAAAGTTTGACAAGAAAGTGTTGGCT
GATGCAAGAAAAAAGTTATTAGCAGAAAAGCGAGCGCAAGCTATTGTTGAACAGTTGCTG
GAAAGTAATGTCTCCGAGGATTTATTCCAAAAGTCGGTTTATTACTTGAGCGTTGACCGT
TATGCTGATGTAGTGGAAGAAAGATCAATCACAAAAATATGTGGTTATCCTTTATGTTCG
AATAGTCTGAAAAATATACCAAGGCAGCAGTACAAGATTTCGAACAATGTTGTTTATGAT
ATCACAGAGCGAAAGAAGTTTTGCAGCAATTTTTGTTACCAATCATCTAAATATATTCAA
GAACAAATTCCAACCTACCCATTGTGGTTGAGGGAATCTGATGATAAAGTGAGAATTACT
CTTTTGAAGATTGGATCTGGTTCGAAGGGTGAAAAAGTCGATCTACTACATTTTGTTCAA
CCTAGTGATGCTGAAATGGAGTCTGAATTTCAGGATGAGAGCCAAGCAGATGCCACACAT
AATTCAAGTACCGATAATAATTGTAGGGAAGTTAGAGAATCAAGGAAAAAGACAACCCGA
ATAAAATTGTGTGACCCAACGAAGAGCCCGGGTTTGGTTACTAGATGTAATGAAAAGATA
AAAGTTGATTTGGATGAATTGGTTGGTTTGTTTGGGGAGTGGGTCACAAGAAAGACTTTG
GTAAGACTTAAATTGCTTCCAGAAGATGACACCCATGTTGATGTTGCTCCTGTGGATGCC
AATGAACAAAGAAGAGCAGCCAAGCTGAAGTTGCTGGAGGAGAGGATGAATAAGATTGCG
GGAGGTAAGCAAATCCAGGAAAAGCAACCACTTCCAAGTTATGAAGAAGTGAATGAATAT
GGTCAGCGGGTTGAACAATATTTTCGAGGACAGTTCACTGCAGTTCAAGGTAGACATGTG
ATGAAACCAAACAAAAAGAAAAGTGATGAAGAAGAGGACACAACTTCACAGCATGTTGTT
CCTACTGTCGATTCAAAGAACCAGTTAAGCATAAGAAAAAGGATATTAATGGAAAAGTTT
TCTAAATCGCTTTCAACTATTGACTCCACCATGCACAATCCAGCAATTTTACAAGACATT
CGATGTGTAGTAGACACTTTTAATTTAACGAGCAAAAATGTCATGCTTAAGCCTGATCAA
CTTGTTGTTGTCACCCTCATGATTCTTGAATTGTTACAAAGAAGTTCCAGTTTTTCAAAT
ACTTTACTTTCATCATCTGTTTCTGCATTTTTAAAAACTATCAGCCTAGAAATTGAAGAA
ATTAAAACAGCTGTTGAGCACATTGTTGAAAAAATTGTTTCTAGGCCCCCTTAATGTGTA
TATATTTATTTTCACTTTGTCTCCCTCTATATATATATATAAACTCTTTTTTTTAACTCT
TTATATATATACCTTTTTTGTTTCAG

InterProScan

Gene3D
Rtr1/RPAP2_sf (IPR038534) - T[17-175] 5.0E-35
ProSiteProfiles
Rtr1/RPAP2 (IPR007308) - T[68-149] 23.358
Pfam
Rtr1/RPAP2 (IPR007308) - T[72-140] 9.1E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPAP2_HUMAN 48.718 % 148 7.42E-39