Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.414.v1.A.SL3-1

Possible name(s)

RPAP2

Gene model

KH2012:KH.C2.414

Location

KhC2 [1,396,931 / 1,398,454]

Sequences

Amino acid sequence

Length: 474

>KH.C2.414.v1.A.SL3-1
HLLCLAQFTDSPISFEFTNMSDTSTKNKQKFDKKVLADARKKLLAEKRAQAIVEQLLESN
VSEDLFQKSVYYLSVDRYADVVEERSITKICGYPLCSNSLKNIPRQQYKISNNVVYDITE
RKKFCSNFCYQSSKYIQEQIPTYPLWLRESDDKVRITLLKIGSGSKGEKVDLLHFVQPSD
AEMESEFQDESQADATHNSSTDNNCREVRESRKKTTRIKLCDPTKSPGLVTRCNEKIKVD
LDELVGLFGEWVTRKTLVRLKLLPEDDTHVDVAPVDANEQRRAAKLKLLEERMNKIAGGK
QIQEKQPLPSYEEVNEYGQRVEQYFRGQFTAVQGRHVMKPNKKKSDEEEDTTSQHVVPTV
DSKNQLSIRKRILMEKFSKSLSTIDSTMHNPAILQDIRCVVDTFNLTSKNVMLKPDQLVV
VTLMILELLQRSSSFSNTLLSSSVSAFLKTISLEIEEIKTAVEHIVEKIVSRPP

Nucleotide sequence

Length: 1,523

>KH2012:KH.C2.414.v1.A.SL3-1
TTATAGCACTTGTTGTGTTTAGCACAGTTCACTGATTCTCCGATTTCATTTGAGTTTACA
AATATGAGCGATACTTCTACCAAAAATAAGCAAAAGTTTGACAAGAAAGTGTTGGCTGAT
GCAAGAAAAAAGTTATTAGCAGAAAAGCGAGCGCAAGCTATTGTTGAACAGTTGCTGGAA
AGTAATGTCTCCGAGGATTTATTCCAAAAGTCGGTTTATTACTTGAGCGTTGACCGTTAT
GCTGATGTAGTGGAAGAAAGATCAATCACAAAAATATGTGGTTATCCTTTATGTTCGAAT
AGTCTGAAAAATATACCAAGGCAGCAGTACAAGATTTCGAACAATGTTGTTTATGATATC
ACAGAGCGAAAGAAGTTTTGCAGCAATTTTTGTTACCAATCATCTAAATATATTCAAGAA
CAAATTCCAACCTACCCATTGTGGTTGAGGGAATCTGATGATAAAGTGAGAATTACTCTT
TTGAAGATTGGATCTGGTTCGAAGGGTGAAAAAGTCGATCTACTACATTTTGTTCAACCT
AGTGATGCTGAAATGGAGTCTGAATTTCAGGATGAGAGCCAAGCAGATGCCACACATAAT
TCAAGTACCGATAATAATTGTAGGGAAGTTAGAGAATCAAGGAAAAAGACAACCCGAATA
AAATTGTGTGACCCAACGAAGAGCCCGGGTTTGGTTACTAGATGTAATGAAAAGATAAAA
GTTGATTTGGATGAATTGGTTGGTTTGTTTGGGGAGTGGGTCACAAGAAAGACTTTGGTA
AGACTTAAATTGCTTCCAGAAGATGACACCCATGTTGATGTTGCTCCTGTGGATGCCAAT
GAACAAAGAAGAGCAGCCAAGCTGAAGTTGCTGGAGGAGAGGATGAATAAGATTGCGGGA
GGTAAGCAAATCCAGGAAAAGCAACCACTTCCAAGTTATGAAGAAGTGAATGAATATGGT
CAGCGGGTTGAACAATATTTTCGAGGACAGTTCACTGCAGTTCAAGGTAGACATGTGATG
AAACCAAACAAAAAGAAAAGTGATGAAGAAGAGGACACAACTTCACAGCATGTTGTTCCT
ACTGTCGATTCAAAGAACCAGTTAAGCATAAGAAAAAGGATATTAATGGAAAAGTTTTCT
AAATCGCTTTCAACTATTGACTCCACCATGCACAATCCAGCAATTTTACAAGACATTCGA
TGTGTAGTAGACACTTTTAATTTAACGAGCAAAAATGTCATGCTTAAGCCTGATCAACTT
GTTGTTGTCACCCTCATGATTCTTGAATTGTTACAAAGAAGTTCCAGTTTTTCAAATACT
TTACTTTCATCATCTGTTTCTGCATTTTTAAAAACTATCAGCCTAGAAATTGAAGAAATT
AAAACAGCTGTTGAGCACATTGTTGAAAAAATTGTTTCTAGGCCCCCTTAATGTGTATAT
ATTTATTTTCACTTTGTCTCCCTCTATATATATATATAAACTCTTTTTTTTAACTCTTTA
TATATATACCTTTTTTGTTTCAG

InterProScan

Gene3D	Rtr1/RPAP2_sf (IPR038534) - T[17-175] 5.0E-35
ProSiteProfiles	Rtr1/RPAP2 (IPR007308) - T[68-149] 23.358
Pfam	Rtr1/RPAP2 (IPR007308) - T[72-140] 9.1E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RPAP2_HUMAN	48.718 %	148	7.42E-39