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TRANSCRIPT CARD

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  1. Clone 'cien60746' > 
  2. Clone 'citb1m16' > 
  3. Clone 'man29b03' > 
  4. Transcript 'Phmamm.CG.MTP2014.S7...' > 
  5. Transcript 'KH2012:KH.C2.520.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.520.v1.A.nonSL2-1

Possible name(s)

CWC22; NOM1

Gene model

KH2012:KH.C2.520

Location

KhC2 [2,653,739 / 2,658,201]

Sequences

Amino acid sequence

Length: 801

>KH.C2.520.v1.A.nonSL2-1
LLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANEGKDGYDKPSATLGRKERRRQM
KKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKPESGATKRKRKRAKLLEKQEEF
VREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFLLDVIGQGETESGLNDLKNETK
NYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEEDFDDASDEPDEEDLVEEDEMG
SDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEESISGKYVPPALRRNMSEKENE
KRRKLERQIKGWLNRLSESNLGMICSEICAIYQVNSRAFVTEILTDVILVQFFTPDPIPE
RLITESSMLIGVLCHNIGVEVVAHFIEAACRKLGKIFLMQNYGKGKECNNIVQLLCSLYQ
VRTMQTQIVLDLIEKFIVGFTEKDIELLVLVLKNVGFQLRKDNPILLKEIVEKITKQSQE
LTQDNSSRMKYMLEVLTAIKNNNVRKVTEYDVELLNNRRKKIKLLIKAESEILPDVSFQD
LVDAETKGRWWIVGSSWKGVPMLKKSTETTVEVDTNVSSQLIEAARKLRMNTDVRRGIFY
AIMSAEDYMDAFERVVKMGLKGKQLREISHVVVECCIQQRSFNLFYYHLLNKFCLYNREF
IMTTQCTFWDKFKLLASYSKMQLSNLSSLVSSLLLSQALPLACLKTLEYTEMDKPMVSFL
RQVLIRISRSENADSKISEIFPKLGSSKHSLVRQGLKLFIQHFMLGDANFMKEHEDIKDC
LTNMDNKLVSSKQSSIFGGVC

Nucleotide sequence

Length: 2,520

>KH2012:KH.C2.520.v1.A.nonSL2-1
ATTACTTACTTCGGTATCTACAATTATAATGAGGAGACGAAACCATGATAAAGGCAAGAT
GAGGTTTAACACAATTGTAAAAAACGTGATAAGCGATTTTGGAGAGGAGGCGAACGAAGG
AAAGGATGGTTACGATAAACCCTCAGCGACTCTTGGTCGAAAAGAACGCAGAAGACAAAT
GAAAAAACAGCGTAAGAGTCGTCAAATGGAGCCTGTTGAGCACGTTGTAGCGACAGAGCT
GGTAAAATCACAGCCGCCTAAAAACCCCTTTAAAAAAACTAGACAAAAACGAAAACCGGA
AAGTGGGGCAACAAAACGGAAGCGAAAGCGAGCGAAACTTCTTGAAAAACAAGAAGAGTT
TGTGAGGGAAGACAATACTGAAGATGATAGGACAATCCAAAACATTGAAAAGTTGATGAA
AATAAAGAAGAAAAAGACACTTCCATCAGCATTTGCAAGTGACGGATTGGATTTTCTACT
TGATGTTATTGGACAAGGAGAAACTGAAAGCGGATTAAACGATCTTAAAAATGAAACAAA
GAACTATGAGGATGGTGATGTCATCCATCACAGTGATGGTCTTGATAGTGATGATGAGGA
GGGGGACGATCAGGATGAAGATATCTTGGATGATGTTTTGTCAGATGTGCCGGAGGAGGA
TTTTGATGATGCGAGTGATGAACCAGATGAGGAGGATTTGGTTGAAGAAGATGAGATGGG
AAGTGATGCTGGTTGGGTGAATGAAGTTGAAAGTGAAGATGTTAGTGAAGAAGAAGCATC
TGTTATTGATGATGAAGAAAATAATGCTGTTGTTGTAAAACCAGTTGAAACTGAGGAAAG
TATCAGTGGAAAATATGTTCCACCTGCCTTGAGACGGAATATGTCAGAAAAGGAAAACGA
AAAACGAAGAAAACTTGAGCGGCAAATCAAAGGATGGTTGAACAGATTAAGTGAGTCAAA
TCTGGGAATGATTTGTTCTGAAATTTGTGCCATCTATCAAGTAAATAGTCGAGCGTTTGT
AACTGAGATATTGACAGATGTAATATTGGTACAGTTTTTCACTCCCGACCCAATACCAGA
GCGACTTATAACAGAATCCTCAATGTTAATTGGTGTCCTTTGTCATAACATTGGTGTGGA
GGTGGTGGCCCATTTTATTGAGGCAGCATGCAGAAAACTGGGCAAAATTTTTTTGATGCA
AAATTATGGAAAAGGAAAGGAATGTAACAACATTGTGCAACTTCTCTGTAGTTTGTACCA
AGTGCGAACTATGCAGACACAGATTGTTTTGGATTTAATAGAGAAGTTTATTGTTGGTTT
CACTGAAAAGGACATTGAACTTCTGGTGCTTGTGTTAAAAAATGTTGGTTTTCAATTAAG
AAAAGATAATCCTATTCTACTGAAAGAAATAGTGGAAAAAATTACCAAACAATCCCAAGA
ATTAACACAAGATAATTCTTCTAGAATGAAATACATGCTTGAGGTTTTGACTGCGATTAA
AAACAACAATGTTCGAAAAGTAACAGAATACGATGTAGAACTTTTAAACAACAGAAGAAA
GAAAATCAAACTTTTAATTAAAGCAGAATCAGAAATTTTGCCAGATGTATCATTTCAGGA
TCTGGTTGATGCGGAGACAAAAGGAAGATGGTGGATCGTGGGAAGTTCATGGAAAGGAGT
TCCGATGCTAAAGAAGTCAACGGAAACTACTGTAGAAGTTGACACCAACGTCAGTTCCCA
GTTGATAGAAGCAGCTCGTAAATTAAGAATGAATACTGATGTTCGTAGGGGAATATTTTA
CGCTATTATGTCAGCTGAGGATTACATGGATGCCTTTGAAAGAGTGGTAAAGATGGGTTT
AAAGGGAAAACAACTTCGTGAGATTAGTCATGTTGTTGTGGAATGTTGTATTCAACAAAG
ATCATTCAACCTCTTCTATTATCATCTACTGAATAAATTCTGTCTTTATAACAGAGAATT
CATAATGACAACACAATGTACATTCTGGGATAAGTTTAAACTTCTTGCCTCGTACAGTAA
AATGCAACTTTCGAATCTATCAAGTTTAGTTTCAAGTTTGCTTCTTTCGCAAGCACTTCC
ACTTGCATGTCTGAAGACACTTGAGTACACGGAAATGGACAAACCAATGGTTTCATTTTT
ACGTCAGGTTTTAATTCGGATATCAAGATCAGAAAATGCAGATTCTAAAATAAGTGAGAT
TTTCCCGAAACTTGGATCTAGCAAGCACTCCCTGGTTCGTCAAGGATTAAAACTTTTTAT
TCAACATTTTATGCTCGGTGATGCTAATTTCATGAAAGAACATGAAGATATAAAAGACTG
TTTAACAAACATGGATAATAAACTCGTGTCTTCAAAGCAATCATCAATTTTTGGTGGAGT
GTGTTAATACTGTTGTGAACTTGTGGTTACCGAATTTTTTGTTCTGTTTTACAATTATGT
GTTGGTATATGTATTACTATTATGTATTGGTCCAGTTTGATATATCTGGACTTTTGACAG

InterProScan

Gene3D
MIF4-like_sf (IPR016021) - T[273-547] 8.8E-49
SUPERFAMILY
ARM-type_fold (IPR016024) - T[296-504] 2.73E-23
SMART
MIF4G-like_typ-3 (IPR003890) - T[306-503] 1.5E-9
Pfam
MIF4G-like_typ-3 (IPR003890) - T[307-503] 1.6E-12
ProSiteProfiles
Initiation_fac_eIF4g_MI (IPR003891) - T[593-709] 17.684
SMART
Initiation_fac_eIF4g_MI (IPR003891) - T[594-700] 3.6E-9
Pfam
Initiation_fac_eIF4g_MI (IPR003891) - T[594-700] 5.3E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOM1_HUMAN 41.604 % 409 2.24E-130