Aniseed - Transcript Card

Transcript 'KH2012:KH.C2.585.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.585.v1.A.SL1-1

Possible name(s)

MTERF3; MTERF4

Gene model

KH2012:KH.C2.585

Location

KhC2 [5,444,250 / 5,447,530]

Sequences

Amino acid sequence

Length: 396

>KH.C2.585.v1.A.SL1-1
FVRPCFKMFAVCRVCFSKTRIAALKLLQNSHNGLMSYPYQGISTPSKNNIHSSCRQDSDR
ITLNEIGGKNVVPQNVEFFDPEKEFFEDLNTDAKTESPVVEYNEQELPISADSFAAYANV
SEVLQTLIMFGVELYKIEKHNPTAMQFYVKLDLLKDITPKLEYLTTNGILPAEFGQVITK
NPFLLDPNKTIEDLEEITGYLKSKNFTQDQVSLLLVRFPQMWNMSLVKLDGMLGFYQNLP
TNYETKTISFSGDELRNMVLKCPSIVALPTESVYLMIKSMEMSCGFTIQQIRQIISAKPS
MLFRGRNYLHSIYLFCSNEMKLTHKEMARNPFLFDTRLERLVTRHRYLYELGKDIYKDTE
PGYIPLFDVVCSTNEEFCSNCDIGTIAEFEKYMRTQ

Nucleotide sequence

Length: 1,393

>KH2012:KH.C2.585.v1.A.SL1-1
ATTTTGTGAGGCCTTGTTTTAAAATGTTCGCTGTCTGTCGAGTTTGTTTCTCAAAAACAC
GCATTGCAGCTTTAAAATTGCTGCAAAACTCTCACAATGGTTTAATGTCCTATCCTTATC
AAGGCATCTCAACCCCATCTAAAAACAATATCCATTCATCATGTCGTCAAGACAGTGATA
GAATTACACTCAATGAGATTGGAGGCAAAAATGTTGTTCCTCAAAACGTTGAATTTTTTG
ACCCGGAAAAAGAATTCTTTGAAGATCTGAATACAGATGCAAAAACAGAGTCTCCAGTTG
TTGAGTACAATGAACAGGAGTTGCCAATATCTGCCGACAGTTTTGCAGCGTATGCTAATG
TCTCTGAAGTTCTACAAACTCTCATTATGTTCGGTGTCGAGCTATACAAAATTGAAAAGC
ACAACCCGACTGCAATGCAGTTCTATGTGAAATTGGATTTATTAAAAGACATTACACCCA
AACTGGAATATTTAACTACAAATGGTATTCTACCTGCAGAGTTTGGACAAGTTATCACGA
AAAACCCGTTTCTTTTGGATCCAAATAAAACCATAGAAGATTTGGAGGAAATTACCGGGT
ACTTAAAATCGAAAAACTTCACGCAAGATCAGGTTTCTCTTCTCTTGGTTCGTTTTCCAC
AGATGTGGAACATGTCACTTGTGAAACTTGATGGAATGTTGGGGTTTTACCAAAACCTTC
CAACCAACTACGAGACTAAAACCATCTCGTTTAGTGGAGATGAACTTAGGAACATGGTCT
TAAAATGTCCTTCGATTGTGGCTTTACCAACAGAGTCCGTTTATTTAATGATAAAATCAA
TGGAAATGTCGTGTGGATTCACCATACAGCAAATCCGTCAAATTATTTCCGCCAAGCCTT
CTATGCTGTTCAGAGGTCGTAATTACCTTCATTCAATTTATCTGTTTTGTTCGAATGAAA
TGAAATTAACCCACAAGGAAATGGCAAGAAACCCCTTTTTATTCGATACCAGACTGGAGA
GACTGGTAACACGGCATCGGTATCTTTATGAGCTTGGAAAAGACATTTATAAAGACACAG
AACCTGGTTACATTCCATTATTTGATGTCGTTTGCTCAACTAATGAAGAATTTTGTTCAA
ACTGTGATATTGGAACAATTGCAGAGTTTGAAAAATACATGAGAACTCAATAAGTGTTTA
ATGTGATGAAAATTTGTTTTGTTTTGAGTGATATATCACCATTGTTTATCCTGTTGTATT
AACTTCTTGTATTTTGCAACAAATTTCTTCTTTTTGTAATTTTTTTCTGTTTAAAACTTG
CAACAATTATTGCTTCCTGTTTTTTTGGATAAAAGGATTTTAGAAATTAGAAAAAAAAAG
ATTTTGATCTAAG

InterProScan

Gene3D	MTERF_sf (IPR038538) - T[116-395] 3.4E-69
Pfam	MTERF (IPR003690) - T[130-236] 1.0E-6 - T[247-377] 6.9E-9
SMART	MTERF (IPR003690) - T[175-207] 140.0 - T[256-287] 160.0 - T[324-354] 5.3

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MTEF3_HUMAN	31.834 %	151	1.11E-41