Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.766.v2.A.SL2-1

Possible name(s)

CNOT2; CNOT3

Gene model

KH2012:KH.C2.766

Location

KhC2 [6,909,710 / 6,913,553]

Sequences

Amino acid sequence

Length: 358

>KH.C2.766.v2.A.SL2-1
SISAIGSESISQLRQQQQQQNNLSQGGISSPASSMGIPGLNPFNLDQSEFPALAQRTRPI
GSHPSSTNNSKTPYGMLSKQNENTEFQIHNEDFPALPGAAAMNVMKAVFPEQDGRGDESN
TKFNPLGSLQLGGHVTVDKSTHKPPSNQQKGIQVQADNSIKHIPNSMLVDQYGIVGLFAF
IKAAETDPTLVHLALGNDLTTLGLNLNSPDNLYHKFQSPFSRQPCRLQDIDFFVPSEYLT
NAHIRDKLAPIKLNRYGEDLLFFVFYSNPGDVLQLAAAAELYNRDWRYHKEERIWITRAP
GIDPRMKTSTYEQGTYYYFDCQNWRKVAKEFHLEYEKLEERPHLPNLISLHFNPAQHG

Nucleotide sequence

Length: 1,490

>KH2012:KH.C2.766.v2.A.SL2-1
TCAATAAGTGCGATTGGAAGTGAGAGTATATCTCAACTCCGGCAACAACAACAACAACAG
AACAACCTTAGTCAAGGGGGAATCTCATCACCAGCTTCCTCAATGGGAATTCCTGGTTTA
AATCCATTTAATCTCGATCAGTCTGAGTTTCCAGCATTGGCGCAACGGACGAGGCCAATT
GGTTCCCACCCTTCTTCCACCAACAACAGCAAAACCCCATATGGAATGCTAAGTAAGCAA
AATGAAAATACAGAATTCCAAATTCACAATGAAGACTTCCCAGCTCTGCCTGGAGCAGCA
GCCATGAATGTTATGAAAGCAGTCTTTCCCGAACAGGATGGGAGAGGCGACGAGTCTAAT
ACAAAATTTAATCCACTTGGGAGTTTACAACTTGGGGGCCATGTTACTGTGGACAAATCA
ACCCACAAACCACCGAGTAACCAACAGAAAGGAATCCAGGTACAAGCAGACAATTCTATC
AAGCACATCCCTAATTCCATGCTGGTGGACCAGTATGGCATAGTGGGGTTGTTTGCTTTT
ATTAAAGCAGCGGAAACTGACCCAACTTTGGTTCATCTTGCGTTGGGTAACGATCTCACA
ACCCTTGGTCTTAATCTTAACTCGCCAGACAACCTGTATCACAAATTCCAATCACCATTC
TCAAGACAGCCGTGCCGGTTGCAAGATATTGACTTCTTTGTTCCAAGTGAATATCTGACC
AACGCCCACATACGAGATAAGCTGGCACCAATTAAACTGAACAGATATGGGGAAGACCTT
TTGTTCTTTGTGTTTTATTCTAACCCAGGGGATGTGCTACAACTGGCAGCAGCTGCTGAA
CTATATAACCGAGATTGGAGATACCATAAAGAAGAGCGAATTTGGATCACTCGAGCTCCT
GGTATCGATCCAAGAATGAAAACAAGTACCTATGAGCAGGGAACGTATTATTATTTTGAC
TGTCAAAATTGGAGAAAAGTAGCGAAGGAATTCCACCTGGAGTATGAGAAGTTAGAAGAG
CGACCACACCTCCCCAATCTAATATCGTTACACTTTAACCCTGCCCAACATGGGTAGCAC
CTCATAAGTGCCGACGAAGCCATTCAAGAAGTGGGGAATTTTTCACCAACCATACCACTG
CCCATGTTAATCTAATACGCAGCGTCGATAGTTTGATCCTGTGTGCAATTTAACTATAGT
ATCGTTTGAACTATCGCAAGTTACGTTTGACGTACTTTACCTACATTTCGCTAAGCTATT
TCGGCAAACAATCTTTAAAGGTTAGCAATGTTCAATTGATGTTTCTGCAGTACAACTATC
AAATTTCCCTCTTTGCATGGCTTCCTCGGCTATAAAGGCGCACAATATTTTGACAACTAA
TTTTGGCCGCTTCTTTTTTCCTATGCGCTTCTCAGAGCGATATTTTTTGAGACACAGAGT
CTTTGCGCGTTTTCGTCGCAAGACGTTCTAATAAAATATCAATGAAGTAT

InterProScan

Gene3D	CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[162-357] 5.4E-80
Pfam	NOT (IPR007282) - T[215-338] 1.0E-30

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT2_HUMAN	59.877 %	379	6.51E-129