- Clone 'ma336h18' >
- Clone 'ma322g08' >
- Clone 'ma303c23' >
- Transcript 'KH2012:KH.C2.780.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.780.v1.A.SL2-1
Possible name(s)
SRSF4; SRSF5; SRSF6
Gene model
Location
KhC2 [6,627,249 / 6,629,372]
Amino acid sequence
Length: 305
>KH.C2.780.v1.A.SL2-1
FTHGLIGCVTDKPAMSYRSRVYIGRLSHRARENDVEHFFRGYGKINDLMLKNGFGFVIFD
DERDADDAIHDLNGKSLCGERVMLEIAKGTPRGPGGEFVSNYTAPPDSRRESSSRRSSSS
SYYQQQQPRSSTKGIPNHGYRLIVENLSSRVTWQDLKDYMRQCGEVVYADANRYRRNEGV
VEFSSRKEMKYAIEKLNGTEINGRHIKLTPNIKSPSRSRSRSGSRGRKSGRYSRSRSRSG
SRDKSKRSSSRSRSRSPKKAGKRSASKDNHNGVDKRKHSPHSDGSYRSRSRTGSPDGRKS
ASRSP
Nucleotide sequence
Length: 2,123
>KH2012:KH.C2.780.v1.A.SL2-1
TTTTACGCACGGTTTAATAGGTTGTGTGACTGATAAACCAGCCATGTCTTACCGATCGCG
AGTTTATATTGGCAGATTGAGCCACAGAGCGCGGGAAAACGACGTTGAGCACTTTTTCAG
AGGTTACGGGAAAATTAACGATCTTATGCTAAAGAATGGCTTCGGGTTCGTTATTTTCGA
CGATGAGCGAGACGCCGACGATGCAATTCATGACCTAAACGGCAAAAGCTTATGCGGTGA
ACGTGTTATGTTGGAAATCGCTAAAGGTACACCTCGTGGGCCAGGAGGCGAGTTTGTATC
TAACTATACAGCTCCACCGGATAGTAGAAGAGAGAGTTCTTCACGAAGATCGTCATCTTC
ATCTTATTATCAACAACAACAACCGCGTAGTTCAACCAAAGGAATCCCAAACCATGGTTA
TCGCTTAATTGTGGAAAATTTATCATCACGAGTCACATGGCAAGATTTGAAAGATTACAT
GCGCCAGTGTGGGGAGGTTGTGTATGCTGATGCTAACAGGTATCGCAGAAATGAAGGCGT
GGTTGAGTTTTCTTCAAGGAAAGAGATGAAGTACGCAATTGAGAAGCTCAATGGAACGGA
AATAAATGGCCGACATATCAAGCTCACTCCGAATATTAAAAGTCCCTCAAGATCTCGCTC
AAGAAGTGGAAGCAGAGGAAGAAAAAGTGGAAGATACAGTCGCTCTCGATCCAGATCAGG
AAGCAGAGATAAATCTAAGAGGTCGTCTTCACGTAGCCGATCCAGATCGCCCAAAAAGGC
CGGAAAACGCTCAGCTTCGAAGGATAACCATAACGGAGTCGATAAAAGGAAGCATTCACC
TCATTCTGATGGAAGCTACAGAAGCCGCAGCAGAACTGGATCTCCAGATGGAAGAAAATC
AGCTTCTAGATCGCCATAGTTTGAACACAGTTGGAAATCATGGACCACATTTTCCCTGCC
TAAGATGATGCACAAAACACAGAAAAATGTACTAAACTAAAACTAGGCATATACTAGTCA
ACTAAATGCTTGTATATATATTTGTTATCTTGGTTGCACATACGTGACATATTCTTTGGG
CCCCCCTATTTTTATAAACAAAACATTAATAAGGAGTAAACCATTTTTCCCTTTTTCAAC
TGGATAACATATGGTGGCTTATGCACAGAAATCTGTATAAAATCAAATGTAAACATTCTG
ATATTTTTTAGTGGCCAAGCCAAGGGACAATCTCAATCTTATTTTACATTTTGGCAATTC
AATTCAATTTTAGTTGGTTCAATTCAAATTTATTTGGCAAGCAATACAACATGGTCTTAT
AGCTGGCAATGCAATTCAAATCAATTGTAGGGCACACAAGGTACAGCAGCCAAAACAACA
AAACGTGACCCTTTACATTTTGGATCATAGTCAATAGCGTGGGGTTCAATTCAATCTCCC
GAGCAACTGATTTAACTTTAATATCAATAATTTCATTTAAGCAGGTAGGAGTTATGTCTT
CTTGATGTTAGGTATATTTTCTCACGAACGCAGCATGAAGAAGGGAAGTCTTATTTCTGT
TACATTCCTATATTGTAAAGTAAAATTTCCTAAAAAGATGAGACCTAATTGAAAAACTGT
GTAAATAAAAGCTTTGACTAAGATATCTTGTTGATATGTATTTGAACTGTGGTGTATTAC
ACTCTTGTTGTGATTATCGTAAATATTCAATGCTTGAGCTGAATTTTAGTTTCTTTTCAC
TTACATATTAAAGAGCTTTGGTTGTGGGTGTTCTTGTTTTTACATTGGTTAATAATTTTC
ACCCACAAATTAATTCAGTTTCAAGAAACGTGCCTTGCTCTAACAATTGTCACACCCAGG
CACCGAACCCTATAAAAATCAGGGGTGACAGCAGTTGTCAGTCACAAAATCGAATAAAAA
CAATTTTCATCTAATGCTATTTCCAACTGCCTAATGTGATGTAATTGTGGGGCATCATTC
ATTGCCTGCCACCCCAGGTTTGGTGCCTGTGCTGTCAACTATTGATGTCATTAAGTTAAA
ATTGTACAATTCTGAATTAGTCTCACTTGTGTATTGCGTTGTTGATATATAATTGTGTAT
AACCCAATCTTCATTTAGCGCAG
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[10-95] 2.1E-18 - T[139-211] 9.5E-25 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[19-99] 8.88E-36 - T[137-211] 8.88E-36 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[19-89] 16.108 - T[140-213] 12.697 |
| SMART |
RRM_dom (IPR000504) - T[20-85] 1.1E-14 - T[141-209] 7.7E-17 |
| CDD |
RRM1_SRSF4-like (IPR035585) - T[20-89] 2.69994E-37 |
| Pfam |
RRM_dom (IPR000504) - T[21-82] 1.2E-13 - T[142-207] 8.9E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF4_HUMAN | 57.513 % | 207 | 2.54E-63 |
| SRSF6_HUMAN | 51.531 % | 186 | 7.43E-57 |
| SRSF5_HUMAN | 54.974 % | 180 | 2.54E-55 |