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TRANSCRIPT CARD

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  1. Clone 'ciad007g03' > 
  2. Region 'REG00001360' > 
  3. Transcript 'KH2012:KH.C9.778.v1....' > 
  4. EST 'FF730953.1' > 
  5. Transcript 'KH2012:KH.C2.871.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.871.v1.A.SL3-1

Possible name(s)

AL110118.4; UBR7

Gene model

KH2012:KH.C2.871

Location

KhC2 [6,625,326 / 6,627,169]

Sequences

Amino acid sequence

Length: 383

>KH.C2.871.v1.A.SL3-1
DIIAEDDELEETASAVLGGSDDKECTYTHGYVQRQAIYACSTCGTGDEEAGICLACSLEC
HNSHELYELYTKRNFRCDCGNSKYQGFKCKLVPNKAATNEQNVYGQNFKGLYCTCNRPYP
DDEDDIDDEMIQCVVCEDWYHTRHLGETKFTPGLEYSEMVCFECTKRCTFLHKYNAIFAA
PTKVEALSRTDLDKSIDREKNDASNSNGESSKHESKETDTQAKDKNPGSNGAGENGDHKD
KEIKPETGKNICKIKDIPAVKITGATFWPCDWRLVLCRCEDCKSLYDELKVAFLLDENDT
VRAYEDKGKLNRNQTTGLEAVEGMSRVHQIEMIHGFNNMKDGLSDFLKSFADQGKVVTAD
DIKEFFQRLNQKRQRLDLPYNCR

Nucleotide sequence

Length: 1,843

>KH2012:KH.C2.871.v1.A.SL3-1
GATATTATAGCAGAAGATGACGAGTTAGAAGAAACTGCAAGCGCTGTGCTTGGAGGGAGT
GATGACAAGGAATGCACGTACACTCATGGTTATGTGCAGCGTCAAGCAATTTACGCATGC
AGCACTTGTGGCACTGGAGATGAAGAAGCAGGAATATGCCTTGCATGTTCACTAGAGTGT
CATAATTCCCATGAGTTGTATGAACTTTACACCAAGCGCAATTTTCGGTGTGACTGCGGA
AATTCAAAATATCAAGGCTTCAAATGCAAATTGGTACCAAATAAAGCAGCCACCAATGAG
CAGAATGTTTATGGCCAGAACTTCAAGGGTTTGTATTGCACTTGCAATCGACCGTACCCA
GATGATGAAGATGACATTGATGATGAAATGATCCAGTGTGTGGTGTGTGAGGATTGGTAC
CACACCAGACATCTCGGTGAAACCAAGTTCACGCCTGGTTTAGAGTATTCTGAGATGGTT
TGTTTTGAGTGCACAAAGCGTTGCACGTTTTTGCACAAGTACAACGCCATATTTGCTGCT
CCAACTAAAGTGGAAGCCCTAAGTAGGACGGATCTGGATAAATCAATTGATAGAGAAAAA
AATGATGCTTCAAATAGCAATGGTGAAAGCAGCAAGCATGAAAGTAAAGAAACTGATACA
CAAGCCAAAGATAAAAATCCGGGTTCCAATGGAGCAGGTGAGAATGGAGATCATAAAGAT
AAAGAAATTAAGCCAGAGACTGGAAAAAATATTTGCAAAATAAAAGACATTCCTGCTGTT
AAGATTACAGGGGCAACATTTTGGCCTTGTGATTGGCGTTTAGTATTATGCAGATGCGAG
GACTGTAAGAGTCTTTATGATGAGCTAAAAGTAGCTTTCTTGCTCGATGAAAACGACACT
GTGAGAGCTTATGAGGATAAAGGCAAGTTAAATAGAAACCAAACGACTGGCCTTGAAGCA
GTAGAGGGCATGTCAAGAGTACACCAGATAGAAATGATCCATGGATTCAATAATATGAAA
GATGGTTTGTCAGATTTTCTTAAATCATTTGCTGACCAGGGAAAGGTTGTCACTGCCGAT
GATATAAAAGAATTCTTCCAAAGATTGAACCAGAAACGTCAGAGGTTGGATCTTCCTTAT
AACTGTCGCTAAACATAATACACCTTGTTCGTTGTTCTTTTAAAACTATATGCCTTTGTT
TTTTTTATTACTGTTTTTTTTATTACTGGTGTTAGCCGTTATTTTCTATTTGTTACATTT
AATATTTGCTTTTGTAGAATCTTTTATACTTTTGGTTGTTGTTATATTACTGTGGTTTAT
TACAAATGAAATAAAAAGGCCAAATTCCAAGTGCTTGGTAACAATTTACTTCACATTCCC
TTCTATGTAAACATTTCATTTATTTAAAGAAAAATATTTTTTGTGTATTTCAGAAAAAAC
AAGTTATCTTAAACTTTAAATAAACTTTCTTACCTGTTAAACATTGTGCTGTTAATATTT
ACATGATCTGATAAGCATATCTGCATAGGTGTAATATAAAGATATGTTGTTTGACAATCT
GTAACTGCTTCAACGAAGAGTTCCTAGAAGTTTCATACAGTTACAAATTTTCTGTTAAAC
CAGTTGCCTTAGTTGGTATTGGTTTATCTGACAGCAGCGTACTGCTTTGTTGCTCACAGG
ATGTTTATGTTTATGTAGTACTGTGGGTGGAAAACTGTGGGTGTATTTGGATATCCTGTT
ACTACTGTAGTTATAGTTCTGTGGGGTAAGATGGGACACATTAGCACATGCTATCTCATA
TTCTCTAATCGTGTTATAAACAATAAAAAACATCCTTTTGATA

InterProScan

SMART
Znf_UBR (IPR003126) - T[23-93] 6.3E-16
ProSiteProfiles
Znf_UBR (IPR003126) - T[23-94] 8.888
Pfam
Znf_UBR (IPR003126) - T[25-90] 1.2E-12
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[95-169] 2.3E-8
SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[104-172] 3.74E-11
SMART
Znf_PHD (IPR001965) - T[112-165] 0.0033

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBR7_HUMAN 46.193 % 333 6.84E-112