- Transcript 'KH2012:KH.C2.875.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.875.v1.A.nonSL4-1
Possible name(s)
PSMD4
Gene model
Location
KhC2 [4,654,502 / 4,657,631]
Amino acid sequence
Length: 386
>KH.C2.875.v1.A.nonSL4-1
SLTRKFSLKRIKAMVLESTVLCIDNSEFMRNGDYLPTRIQAQQDAANMICRTKLRSNPEN
NVALLSMADTQVHVTLTTDSGKLLSKLNLIQPKGEMKLLNGLRVAHLALKHRQSKNHKTR
IVAFIGSPIQEDEKEIIKVAKKLKKEKVSVDVINFGEQDCNTDKLISFINTLNGKDGAGS
HLVTIPPGSMLSGAIGSSPIVVEEGSMSSGAQEFDMGFDPNADPELALALRVSLEEQRHR
QEEEARRSKNETQSAPATAGGGEETMLDDPPATAPAAPTGEVDIAMMTEDEQIAYALTMS
MQATPEDSVPQTPMETESAAGYQGQIEGDSEDDDDDVIADPDYLQSVLESLPGVNPNSEA
VQQAMTEFTQRKDGEKKDDSSKKDGK
Nucleotide sequence
Length: 1,532
>KH2012:KH.C2.875.v1.A.nonSL4-1
ACTACGAAAGTACTTTGTCGTTATCGTGACAAAACAAATTTTCAGTAACATTTGAAACAA
TTGCGGTATCTGAAGTTTAACTAGGAAATTTAGTTTGAAACGAATCAAAGCTATGGTTTT
AGAAAGCACCGTACTGTGTATTGACAACAGTGAGTTTATGAGAAATGGCGATTATCTGCC
AACCAGGATTCAAGCTCAGCAGGATGCTGCAAACATGATATGTAGAACAAAACTGCGTTC
AAATCCAGAAAATAATGTGGCACTGCTTTCAATGGCCGATACCCAGGTGCATGTCACTCT
TACGACCGACTCCGGAAAACTTCTTTCCAAACTTAATCTCATCCAACCCAAGGGTGAAAT
GAAGTTGTTAAACGGTCTACGAGTTGCTCACCTGGCTTTAAAACATCGGCAAAGCAAGAA
CCACAAGACTAGAATTGTTGCTTTTATAGGCAGCCCTATACAAGAAGATGAAAAAGAGAT
TATTAAAGTTGCGAAAAAGCTAAAGAAAGAAAAGGTTTCGGTTGATGTCATTAATTTTGG
AGAGCAAGATTGCAACACAGACAAACTTATTTCTTTCATTAATACTTTAAATGGAAAAGA
TGGTGCTGGCTCACATCTGGTAACCATTCCACCTGGATCTATGTTATCTGGTGCAATAGG
AAGTTCTCCTATTGTTGTAGAAGAAGGCTCAATGTCATCCGGAGCACAAGAGTTTGATAT
GGGTTTTGATCCTAATGCTGATCCGGAGCTTGCTCTCGCTCTCCGTGTTTCTCTTGAAGA
GCAACGTCACCGGCAAGAAGAAGAGGCGAGAAGATCTAAAAATGAGACGCAGTCTGCTCC
AGCAACGGCTGGAGGCGGTGAGGAGACCATGCTTGATGATCCTCCAGCAACAGCTCCTGC
TGCTCCTACAGGAGAAGTGGACATTGCAATGATGACAGAGGATGAGCAGATTGCTTATGC
ACTCACGATGTCCATGCAAGCAACACCAGAAGATAGTGTTCCTCAGACACCAATGGAAAC
AGAATCTGCGGCAGGATACCAAGGACAGATTGAGGGTGATAGTGAAGATGATGATGATGA
CGTAATAGCTGATCCTGATTACCTGCAGTCTGTCTTAGAGAGTTTGCCCGGTGTAAACCC
AAACAGTGAAGCAGTACAGCAAGCTATGACAGAGTTCACACAAAGAAAAGATGGAGAGAA
AAAGGATGATTCATCAAAAAAAGATGGCAAATAACTGATACGTCCCACTGATTTACAAAC
TGATGAATACTTGGAAACTGTTCATTTCATAAGCTTAGATAATGCTATGAAAAGGAATTT
TATTGTCTATAAATTTAAAGCTGCTTTCATGTAATGAATCTCATTGTTTCGACACAAACA
TATTTACGTAGTATTTAAAATTCATTGTACTGCATGGTGTTTAAATGTTTGCGGCACTAG
CTATAGAAACACGATGTAAACAATAAATCTTTGTTCCAATGATGTGTCTGCTTTAAGTGC
ACAACTAACCTATCAATTTGTTCACTTTACAG
| SMART |
VWF_A (IPR002035) - T[15-200] 3.2E-6 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[16-195] 4.8E-72 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[17-191] 5.13E-32 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[18-200] 9.672 |
| Pfam |
VWF_A (IPR002035) - T[19-125] 9.7E-22 |
| SMART |
UIM_dom (IPR003903) - T[221-240] 3.9 - T[288-307] 0.041 |
| Pfam |
UIM_dom (IPR003903) - T[223-237] 0.16 - T[288-302] 5.1E-4 |
| ProSiteProfiles |
UIM_dom (IPR003903) - T[288-307] 9.705 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PSMD4_HUMAN | 55.71 % | 376 | 1.4E-129 |
| PIPSL_HUMAN | 51.714 % | 331 | 3.43E-106 |