- Clone 'cijv049a19' >
- Clone 'cieg003d03' >
- Clone 'cijv423p05' >
- Clone 'ciad067p06' >
- Transcript 'KH2012:KH.C2.890.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.890.v1.A.SL1-1
Possible name(s)
GDE1; GDPD4; GPCPD1
Gene model
Location
KhC2 [2,092,180 / 2,094,170]
Amino acid sequence
Length: 580
>KH.C2.890.v1.A.SL1-1
SIMECVTKFCVSVTDQMPKECSVFLVGDGNKLGNWKPTDAVKLDLTEAQWEIEMCLNAKE
QIRYRYFIGAMYEGAVVIKQFEVHPTFMTRSIVVPEKENLVVKDIFGVAGDLQSVDCGWL
TSQTEIRVLISSTQGHPITFNKNFGNGMLNKSKLKIKPIAHGDIIGISTTVIEPFQSQQI
VNIPNAGLKIPEDEQMCLLFSMQTLNASSCSINLEIYDNDKRLGVATVAFGALSTSKQAL
NIAVIDDNFLCIGVLKISYLRISPFQCEALNMERLFSRHWKPKPMVHIGHRGSGNSFTSK
LIANVPENTVASFKQANENRAQLVEFDVHLTKDMIPIVYHDLTTSCKVKTKEEPGDVLLE
MPVFHFTLKELQSLDMKHRSRITNTRKLDFNEQDTSPDMQMFPTLKTVLTDVPVETGFDI
EVKWPTLDINNEFEDGLESYIDANVFVDTILKAVYESAGSRRIMFSSFDIDICILLKRKQ
GKYPVFLLTNGDTNFYTPLLDPRERTNGMAVGSCLAEQFLGVITLDKDVYQTPEVIKKIK
SAGVVFGCYGDEVTDNLPMMKQLNVDIAIYDRISKELAKI
Nucleotide sequence
Length: 1,990
>KH2012:KH.C2.890.v1.A.SL1-1
GGTGGACTTTAGGAAGTAGTCAATAATGGAGTGTGTTACTAAATTTTGTGTTTCTGTAAC
TGACCAAATGCCAAAGGAATGTTCGGTGTTTCTTGTTGGCGATGGAAACAAACTGGGCAA
CTGGAAACCAACTGATGCTGTTAAGCTTGATTTGACTGAAGCTCAATGGGAAATAGAGAT
GTGTCTGAACGCGAAGGAGCAAATAAGGTACAGGTACTTTATTGGGGCAATGTATGAAGG
TGCTGTGGTGATTAAGCAGTTTGAAGTTCATCCTACATTCATGACAAGAAGTATTGTGGT
CCCTGAGAAAGAAAATCTTGTGGTTAAAGATATATTTGGAGTTGCAGGCGATTTACAGTC
TGTTGATTGTGGTTGGCTGACAAGTCAAACTGAAATACGAGTTTTAATCAGTTCGACTCA
AGGTCACCCGATTACTTTTAATAAAAATTTCGGTAATGGCATGCTGAACAAATCAAAGCT
GAAAATTAAACCGATTGCTCATGGAGATATCATCGGCATATCTACCACAGTGATTGAGCC
TTTTCAGTCGCAACAAATAGTTAATATTCCAAATGCAGGCCTTAAAATACCTGAAGACGA
ACAAATGTGTTTGTTATTTTCCATGCAAACATTGAATGCTTCCTCCTGTTCAATTAATCT
TGAAATTTATGATAATGATAAACGACTTGGAGTAGCAACAGTTGCATTCGGTGCTTTATC
CACTTCCAAACAGGCCCTCAATATTGCTGTAATTGATGATAACTTTCTCTGTATTGGGGT
CCTTAAAATTAGCTATCTACGTATATCTCCATTCCAATGTGAGGCACTTAACATGGAGAG
ATTGTTCTCCAGACACTGGAAACCTAAACCCATGGTTCACATTGGACATAGGGGAAGTGG
TAATTCATTTACTAGTAAGTTGATTGCAAATGTCCCAGAAAATACTGTGGCTTCATTTAA
ACAAGCCAATGAAAATCGTGCCCAGCTGGTTGAGTTTGATGTTCATTTAACTAAAGATAT
GATTCCTATTGTTTATCATGACCTGACCACTTCATGCAAAGTAAAAACTAAAGAAGAACC
TGGAGATGTTTTACTTGAGATGCCTGTTTTTCATTTTACACTTAAAGAACTTCAGAGTTT
AGATATGAAGCACAGAAGTCGGATTACCAACACCAGAAAGCTGGATTTCAATGAACAAGA
TACAAGTCCAGATATGCAAATGTTCCCCACATTGAAAACTGTTCTAACTGACGTTCCTGT
GGAGACTGGTTTCGACATTGAAGTGAAATGGCCGACGTTAGATATAAATAATGAATTTGA
AGATGGACTTGAAAGTTACATCGATGCGAATGTATTTGTGGATACAATATTAAAGGCAGT
GTATGAAAGTGCTGGATCGCGTCGAATCATGTTTTCTTCATTTGATATTGACATTTGCAT
TTTATTAAAGAGGAAGCAGGGAAAATACCCAGTGTTTTTACTTACTAACGGTGACACCAA
CTTTTATACACCATTGCTGGATCCACGTGAGCGCACAAATGGAATGGCAGTGGGCAGCTG
TCTTGCTGAGCAGTTTCTTGGTGTGATAACTTTGGACAAGGATGTATACCAAACTCCTGA
GGTGATCAAAAAGATTAAATCCGCCGGAGTTGTATTTGGCTGCTATGGAGATGAAGTCAC
TGATAATTTACCAATGATGAAACAGTTGAACGTGGATATTGCAATCTATGATAGAATATC
TAAGGAACTTGCCAAAATCTAAAGGCTCGGTTTACTGACTATAAAAATTAAATGGCAATT
GCTTCACTGTTTTTTTATTTAGATGTTCCTGTGGTTATTAAGTTATTATAATTAAAGTTG
AAATATATTTTTATTTTGTTAGTTAATAATAGAATGTGTGCTATTGTTTCTATTTGCAGG
GTAACTACACTTATAATATAGTGCTTTATTTTGCTTATAAAATATTTCTAATTTGTCTAT
TTATGTGCAG
| ProSiteProfiles |
CBM_fam20 (IPR002044) - T[1-114] 10.175 |
| Gene3D |
Ig-like_fold (IPR013783) - T[3-117] 1.0E-13 |
| PANTHER |
Gde1 (IPR033506) - T[6-576] 1.8E-120 |
| SUPERFAMILY |
Carb-bd-like_fold (IPR013784) - T[8-106] 1.25E-10 |
| Pfam |
CBM_fam20 (IPR002044) - T[16-72] 1.1E-7 |
| SUPERFAMILY |
PLC-like_Pdiesterase_TIM-brl (IPR017946) - T[284-574] 6.02E-40 |
| Gene3D |
PLC-like_Pdiesterase_TIM-brl (IPR017946) - T[285-579] 4.6E-41 |
| ProSiteProfiles |
GP_PDE_dom (IPR030395) - T[285-580] 32.584 |
| Pfam |
GP_PDE_dom (IPR030395) - T[290-574] 3.1E-51 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GPCP1_HUMAN | 32.55 % | 318 | 3.54E-100 |