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TRANSCRIPT CARD

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  1. Region 'REG00001203' > 
  2. Transcript 'KH2012:KH.C4.484.v1....' > 
  3. Transcript 'KH2012:KH.C2.38.v4.A...' > 
  4. Transcript 'KH2012:KH.L18.18.v3....' > 
  5. Transcript 'KH2012:KH.C3.135.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.135.v1.A.SL1-1

Possible name(s)

FARS2; FARSA; FDXACB1

Gene model

KH2012:KH.C3.135

Location

KhC3 [1,659,573 / 1,666,526]

Sequences

Amino acid sequence

Length: 474

>KH.C3.135.v1.A.SL1-1
GPKMSSVILHERSKVAQLLKRYLKRIGISSAGLNLENSAYVHSQVGLHHMQKRYATKHKQ
LGLDNIKISGKTYTCDDWTNVTEKILSYVGKNLHVQKDHPICIIKEAIVQHFYNSYVKAR
RVPLFAVFDNLAPVVTVQQNFDSLLIPQNHVSRKKSENYYVNKNTVLRAHTSAHEHELIK
SGLDAYLMVGDVYRRDTIDATHFPVFHQLEGVRLFNSQQLFSKCEGASADLTLFEVGDET
KDKQSCHTLETSKLLEFNLKQTIEDCIKDIFGKEAECKWVDAYFPFTHPSYELEIKYNDE
WIEMLGCGILRQEILNQAGACDQVAWAFGLGLERLAMKLFNIPDIRYMWTEDESFLAQFR
CHSDFKSIKFKPIVSKQPALVNDVAFWVPTDFTPNDFYDLVRSVDDGLVQTITLIDQFTH
SSGKQSHCYRLFYRHVSRALTQAQVNEVHGKIKRAAVKHLNVEGRWGGESTCSN

Nucleotide sequence

Length: 1,528

>KH2012:KH.C3.135.v1.A.SL1-1
GTATTTGGATTACAATGAAATTTTAGGGTCCTAAAATGAGCTCTGTGATCTTGCATGAAA
GAAGTAAAGTAGCTCAACTGCTTAAAAGATATTTGAAAAGAATTGGAATCAGTTCAGCTG
GCTTGAATCTTGAAAACTCTGCATACGTACATTCTCAGGTGGGTTTACACCACATGCAAA
AGAGGTATGCTACAAAACACAAACAGCTTGGTTTAGACAATATTAAAATATCTGGGAAAA
CATATACCTGTGATGATTGGACCAATGTGACAGAAAAGATTCTCAGTTATGTTGGGAAGA
ATTTACATGTACAGAAGGATCATCCGATTTGCATTATAAAGGAGGCAATCGTTCAACACT
TCTACAACTCCTATGTTAAAGCACGGAGAGTTCCTTTGTTTGCCGTATTTGATAATTTAG
CACCGGTCGTCACAGTTCAGCAGAATTTTGATTCTTTGCTAATTCCACAAAATCATGTTA
GCAGGAAGAAGTCAGAGAATTATTATGTTAACAAGAATACGGTGCTACGTGCACACACAA
GTGCACATGAACATGAGTTGATTAAATCAGGTTTAGATGCTTACCTAATGGTGGGAGATG
TGTATAGACGGGATACAATCGATGCAACACACTTTCCCGTATTTCACCAACTTGAAGGTG
TACGACTTTTCAACTCTCAACAGTTGTTTTCAAAATGTGAAGGTGCAAGTGCTGATTTGA
CGTTGTTTGAAGTGGGTGATGAAACAAAAGACAAACAATCGTGTCACACACTTGAAACTT
CTAAATTACTGGAGTTTAACTTAAAACAAACAATAGAAGATTGTATTAAAGATATTTTTG
GAAAAGAGGCGGAATGTAAATGGGTTGATGCTTACTTTCCTTTCACTCATCCTTCCTATG
AATTGGAGATCAAGTATAATGATGAATGGATTGAAATGTTGGGGTGTGGAATCCTTAGAC
AAGAAATTCTTAACCAAGCTGGTGCATGTGATCAAGTGGCTTGGGCATTTGGGTTGGGGC
TGGAAAGGTTAGCAATGAAATTATTTAATATTCCTGATATTCGATATATGTGGACTGAAG
ATGAATCATTTCTTGCACAATTTCGTTGTCATAGTGATTTTAAATCCATTAAATTTAAGC
CAATTGTAAGCAAACAACCAGCTCTTGTAAATGATGTTGCTTTCTGGGTTCCAACTGATT
TCACGCCAAATGATTTTTACGACCTTGTTCGTAGTGTGGATGATGGGCTTGTACAAACCA
TCACATTAATAGACCAATTCACTCATTCAAGTGGAAAACAAAGCCACTGCTATCGGTTGT
TCTATCGCCATGTGTCCCGTGCTCTTACTCAAGCTCAAGTAAACGAAGTCCATGGAAAAA
TTAAGAGAGCGGCTGTAAAACACCTTAATGTAGAAGGACGGTGGGGAGGGGAATCTACAT
GCTCAAACTAGATGGCTGAGCTCTAATGAATGGGCAGAGTAAAGAAGATTTGTATAAATA
TGAATACATAATTTAAATAGGTACCATA

InterProScan

PANTHER
Phe-tRNA-synth_IIc_mito (IPR004530) - T[59-465] 5.3E-147
TIGRFAM
Phe-tRNA-synth_IIc_mito (IPR004530) - T[65-463] 3.8E-126
Pfam
Phenylalanyl-tRNA_Synthase (IPR002319) - T[134-213] 3.5E-15 - T[258-359] 1.5E-28
Gene3D
Fdx_antiC-bd_sf (IPR036690) - T[370-465] 2.4E-27
SUPERFAMILY
Fdx_antiC-bd_sf (IPR036690) - T[374-465] 1.44E-22
ProSiteProfiles
Fdx_antiC-bd (IPR005121) - T[375-465] 18.877
Pfam
Fdx_antiC-bd (IPR005121) - T[375-465] 4.4E-20
SMART
Fdx_antiC-bd (IPR005121) - T[375-465] 1.5E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SYFM_HUMAN 53.102 % 469 2.47E-163