- Transcript 'KH2012:KH.C3.339.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.339.v1.C.SL1-1
Possible name(s)
FNTA; NISCH; RABGGTA
Gene model
Location
KhC3 [5,507,648 / 5,513,463]
Amino acid sequence
Length: 559
>KH.C3.339.v1.C.SL1-1
KAIAMHGRLKVKTTAVQEEEKRIKRQKKLKLFQGALAAAFKKIHSKEYDPEGLYITQEIL
AANSDYYTIWNYRKNAFLHFKNTKTSDELLKCFQDELSFLQNCLKNNPKSYSCWNQRCFV
LLTMSDPDWKKELQLCDLFLQFDDRNFHCWDYRRFVVQHSAVLPGEEIQFTHKLIENNFS
NYSSWHYRSKLLPIECPDASDKNRIGEKMLLEELELVQNAFFTDPNDQSAWFYHRWLLGR
GETKQSLLSLHVSLLDNKLTCTLRKPASIKDCSRLNVYINDNPHVVVWKGCNQGKYQHVW
QSDLPKKDLFSGENKIKVEFGSSELMVEMTGQDEAISCIQTNTETFRQSSSDAKLSVLTE
ELKSCEELNDLEPGNKWVMLTLVLLMRAIDPTHYSSQVHDTLHELCTVDGMRQCYYQDLM
SKFVIEDHIAAVDLHQRCIDLHGKALTRVCRFEFFSTITSLNLSHNQLHSLNSPFKLLHC
LQKLDVSENEIVEISGLKDLTKLVLLNLDSNKISSLKTLEPVTTCAALQKISVKSNRIPL
EDIDSLLQILPNVEIVYES
Nucleotide sequence
Length: 2,465
>KH2012:KH.C3.339.v1.C.SL1-1
AAATCGTTCGACTCGAGACGTGCATCGTATTCACGTAATCAAAAGCGTTTACAATGCACG
TCAGTATTAATAAATTGTACAGCAATAGCACAAAGTTGACGAAATAAATTCATCTTTTTA
AAGCAAAAACGTTTGTGGGAGCATAGAAAGCCATCGCAATGCATGGACGTTTAAAAGTGA
AAACAACTGCAGTACAAGAAGAAGAGAAAAGAATAAAACGACAGAAAAAATTGAAATTAT
TTCAAGGAGCACTCGCTGCTGCTTTTAAAAAGATACACAGCAAAGAATATGATCCAGAAG
GACTTTATATTACACAGGAAATATTGGCTGCAAACTCTGATTACTATACCATCTGGAATT
ACAGAAAAAATGCATTTCTTCACTTTAAAAATACAAAAACATCTGATGAATTGCTGAAAT
GTTTTCAAGATGAACTAAGTTTTCTTCAAAACTGTTTGAAAAATAATCCAAAGTCATATA
GTTGCTGGAACCAAAGATGTTTTGTCCTTCTAACAATGTCCGATCCAGACTGGAAAAAAG
AACTTCAACTTTGTGATTTGTTTCTGCAGTTTGACGATAGAAATTTCCATTGTTGGGATT
ACCGAAGATTTGTTGTGCAACACTCTGCAGTGCTGCCAGGTGAAGAAATCCAATTCACTC
ACAAGTTGATCGAGAACAACTTCTCAAACTATTCATCCTGGCATTATAGGAGCAAGTTGC
TCCCTATCGAATGTCCGGATGCAAGTGATAAAAATCGGATCGGAGAGAAAATGTTGCTGG
AAGAATTGGAACTCGTACAAAATGCTTTCTTTACCGATCCTAACGATCAAAGTGCTTGGT
TTTATCATCGATGGCTGTTAGGAAGAGGTGAAACAAAGCAGTCACTTCTCAGTCTTCATG
TTTCACTTCTAGACAACAAACTTACTTGCACTTTAAGGAAGCCTGCTTCAATAAAAGACT
GTAGTCGTTTAAATGTTTATATAAACGATAATCCTCATGTTGTTGTGTGGAAAGGATGTA
ACCAAGGAAAATATCAACATGTATGGCAAAGTGATCTTCCTAAGAAAGATCTCTTTTCCG
GAGAAAACAAAATCAAAGTTGAGTTCGGATCATCCGAGCTGATGGTTGAGATGACAGGAC
AGGACGAAGCGATCTCGTGCATCCAGACGAACACCGAGACCTTCCGTCAGTCGTCAAGCG
ACGCAAAATTATCCGTGCTCACTGAAGAACTCAAATCTTGCGAGGAATTAAACGACTTGG
AGCCAGGAAACAAATGGGTTATGCTGACTCTGGTTCTTCTCATGCGAGCAATTGATCCCA
CCCATTATTCATCACAAGTACATGACACACTGCATGAGTTATGTACAGTTGATGGTATGA
GACAATGCTATTATCAGGACCTGATGTCAAAGTTTGTGATAGAAGACCACATCGCTGCAG
TTGATTTGCACCAGAGATGTATTGACCTACATGGCAAAGCATTGACACGAGTTTGTCGGT
TTGAGTTTTTCTCCACCATAACAAGTCTCAATCTTTCCCATAATCAGCTACATAGTCTCA
ACTCTCCCTTCAAACTTCTACACTGTTTACAGAAACTTGATGTAAGTGAAAACGAAATTG
TGGAAATCTCTGGTTTAAAGGATCTTACAAAACTTGTTTTATTAAACCTTGATTCGAACA
AAATCTCATCATTGAAAACCTTAGAACCTGTGACCACATGCGCTGCTCTGCAGAAAATAT
CCGTAAAATCGAATCGAATTCCCTTGGAAGATATTGACTCACTTTTACAAATTCTACCCA
ATGTAGAAATAGTATATGAATCATAAATATAGCAAAATTGTATTATGTTGTGTTTGTTTT
GTCCAGCACACTGTTTAAATAGGTAATCTTTAACCCTTTAACTGCTGCCTCTTTCAGATT
TTTAACTTTTGACCAGGTCTCACCTAATTGGATTTTGCAACCAAACTATAGCAGTTAGAG
CAAAACATGCTATAGAAAGTTGTCAAGTATGAAATTGTTTTCAACATTATATTTTTTTGA
TGACGTCATCAACCTTGCCTTAATGGTCATAAATGCGACTACGGCAGTTAAGGGGTTAAC
GTTAAAACAATTGCATGCTATTACTCCTTGTACTATCTCAGCGCAGTACGACTTCTGCGC
ATGTTTGTAGCACCGAACCATACTATACGAATTTAAACTTTGCAAATTTATATAAATCAT
GGCAATCTTAATCATAAGTAATTATTAGTAAAAGTTTTATGGCCCAGCTTTTTAACGACA
CACCAATATATGTCATTAAATTAAAAAAGTAGATGCAAAATACTATTTGATTTTTACACA
CATAAATAATGCTTTTTTATTCTGTTTATTCTATTTGCATATTGTACTGTGTCATATTTA
TGTAATTGTGGAAAAAAATTAATTTTACATGTGAACCTAAATACTTTCATATTCTGCAGA
AATAA
| PANTHER |
RabGGTase_alpha (IPR032955) - T[5-426] 6.3E-109 |
| ProSiteProfiles |
Prenyl_trans_a (IPR002088) - T[48-82] 10.531 - T[92-126] 15.497 - T[128-162] 15.842 - T[163-197] 13.913 - T[209-243] 15.09 - T[357-391] 4.504 |
| Pfam |
Prenyl_trans_a (IPR002088) - T[96-121] 3.4E-8 - T[132-159] 6.6E-7 - T[167-192] 9.4E-9 - T[213-239] 6.4E-9 |
| Pfam |
RabGGT_asu_insert-domain (IPR009087) - T[247-319] 9.7E-7 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[422-557] 7.6E-19 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[457-478] 7.335 - T[480-501] 8.12 - T[502-523] 7.835 - T[527-547] 4.855 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PGTA_HUMAN | 41.975 % | 439 | 7.01E-149 |