- Transcript 'KH2012:KH.C3.481.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.481.v1.A.SL1-1
Possible name(s)
VPS25
Gene model
Location
KhC3 [2,754,400 / 2,755,694]
Amino acid sequence
Length: 177
>KH.C3.481.v1.A.SL1-1
KMGTTSNFRWPWQYDFPPFFTMQKNADTRFKQTEAWCSLILDYHNHHKLFRLRVTDVLAS
PLFYNKAIDRRLTKPDVIEILSILHKKGNIEWEDKEKTVCKVFWKTPAQWSDIIFKWVNQ
SGLNNTVCTLHEITNGPHSSDQEFYALDDQILMQAIQILQASGKAELMGTEGVKFFT
Nucleotide sequence
Length: 1,294
>KH2012:KH.C3.481.v1.A.SL1-1
TCGTATAGATGCTGATTACTTAGTGTTAACTTGGATACTATAGATCCTACAAATCCTCTA
TATTTGTTGTTTAAATATTGTTAGTACGATTAGTTCTGAAAAATGGGAACTACTAGCAAC
TTTAGATGGCCATGGCAGTACGATTTCCCACCTTTTTTTACAATGCAAAAAAACGCGGAC
ACCAGATTTAAACAAACAGAAGCATGGTGCTCACTCATCCTAGACTACCATAACCACCAC
AAATTATTTCGACTTCGTGTCACAGATGTCCTTGCTTCACCACTCTTTTACAACAAGGCG
ATTGACCGCAGGTTAACTAAACCTGATGTCATTGAGATTCTTTCTATTCTTCATAAAAAA
GGCAACATTGAATGGGAGGACAAAGAAAAAACAGTCTGTAAAGTGTTTTGGAAGACACCT
GCACAGTGGTCAGACATTATCTTTAAATGGGTAAATCAGAGTGGACTCAACAACACAGTT
TGCACTCTACATGAAATTACAAATGGTCCTCATTCTTCTGATCAAGAGTTTTATGCACTT
GATGATCAAATTCTTATGCAAGCAATTCAAATTTTGCAAGCGTCTGGCAAAGCTGAATTA
ATGGGAACTGAGGGAGTTAAATTTTTCACCTAACCCGGGCAAAAAATTAGACCATCACAT
TTAACGTTCTGTAGGATGTTGTTAGTAGGTCTATTATATCTTGTGAACGCAAGGGTGGTG
CTAAAAATGCTAAATTAATGCCATTTAACTGCTTAAAATCTTTTTCAAAACAAATGTATT
TTGATAGTTGGTGTTAAGCAACATATTCTGCAATATATCTACATACGCAGAGTCTATCTT
GTGAACTATTTCTTTATATGCTTAATATTGTCTTCATTTGCCTTTGTATCTGTGTTTGCA
TTGCAGAAATGTTGTGAAATATTTTTGAAAGTGCTAATTTGTGGGGATCTAAAATGGTTT
TAATTTCAAAGAAATGTTTTTGGGGGACAAGGGGCGAGCAATGGCCAATCAAGAGTATGG
TTCAAAAATAATCAATTCGTTTGTGCACAGATTTTTAAAAAAAAGGTGGTGACGATAATT
GTTTTTTTATTGTTTTTTTTAACACTTTATAAGTATTTAATAATTTCACACCAATTTATT
AAAGTTCATACATGCATTTTCCAAGTTGAAAGTTTTAATTATAATAAAGAAATTTTATGT
TATAATGAAAAGTATCAAGTTATATTTTGGTTAGTTTTGTGTATATATGAATTGTACTTT
GCTGTTATATATCCTTTGTCTTAATTTTCTGCAA
| Gene3D |
ESCRT-II_cplx_Vps25-sub_N (IPR014041) - T[4-102] 3.4E-34 |
| PANTHER |
ESCRT-II_cplx_Vps25-sub (IPR008570) - T[5-176] 1.8E-64 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[8-110] 1.25E-30 - T[105-172] 1.24E-17 |
| Pfam |
ESCRT-II_cplx_Vps25-sub (IPR008570) - T[13-148] 3.4E-48 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[103-176] 3.8E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS25_HUMAN | 46.821 % | 173 | 7.72E-56 |