Aniseed - Transcript Card

Clone 'ma340k12' >
Transcript 'KH2012:KH.C3.740.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.740.v1.A.nonSL2-1

Possible name(s)

EXD2; EXD3; WRN

Gene model

KH2012:KH.C3.740

Location

KhC3 [652,763 / 653,341]

Sequences

Amino acid sequence

Length: 175

>KH.C3.740.v1.A.nonSL2-1
QSTLAPSSVIGFDIEWPVSYIKGKRDITATIQICPNKKQCFVFQVSKMGMIPSPLKKLIE
STEIKKTGVNVIGDMWKLHRDFNIFPDHSLMSQSYIELSHFASSTINSSQGWSLQRLCQY
FLKSDLSKEKNIRSGDWATFPLSEDQLYYAALDAYASLLVHESILNWKPASAQFS

Nucleotide sequence

Length: 578

>KH2012:KH.C3.740.v1.A.nonSL2-1
TGCAATCAACTTTGGCTCCAAGCTCCGTAATCGGCTTTGATATTGAATGGCCTGTCAGTT
ATATTAAGGGGAAACGTGATATAACCGCCACCATTCAAATATGTCCAAATAAAAAACAAT
GTTTTGTCTTTCAAGTTTCAAAAATGGGAATGATTCCTTCTCCTCTGAAAAAGCTGATAG
AAAGCACAGAAATAAAGAAGACTGGTGTTAATGTGATAGGAGATATGTGGAAACTTCACC
GTGACTTTAATATCTTTCCCGATCACAGTCTCATGTCACAATCTTACATAGAGCTTTCAC
ATTTTGCGTCAAGTACTATAAATAGCTCACAAGGCTGGAGCCTTCAAAGGCTGTGTCAGT
ATTTTCTTAAGTCCGACTTATCTAAAGAAAAGAACATTCGTTCAGGCGATTGGGCCACAT
TTCCACTGTCTGAAGACCAACTATATTATGCAGCATTGGATGCTTATGCAAGTTTACTCG
TCCATGAATCAATTTTAAACTGGAAACCTGCTAGTGCTCAGTTCTCTTAATTCTTACTTT
TTATCATCTTCATTTAATCTTTTAATCAAAATATTAAG

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[1-172] 8.9E-48
SMART	3'-5'_exonuclease_dom (IPR002562) - T[1-169] 1.8E-13
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[4-166] 6.22E-30
Pfam	3'-5'_exonuclease_dom (IPR002562) - T[5-165] 4.3E-24

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
WRN_HUMAN	40.123 %	141	2.21E-39