- Clone 'cien43039' >
- Clone 'cien112807' >
- Clone 'citb15i9' >
- Clone 'cien109085' >
- Transcript 'KH2012:KH.C3.877.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.877.v1.A.SL1-1
Possible name(s)
ZNF180; ZNF287; ZNF629
Gene model
Location
KhC3 [4,198,485 / 4,207,310]
Amino acid sequence
Length: 759
>KH.C3.877.v1.A.SL1-1
KYHNSSMEFVKSSKTEVMSDPVLQDPHIMIHGQNDKKKMDEFSQSTINSVANDDLTEEPP
SSVSSSLPMYLLTTEGSDGCTQRYIVSDPFKDSEIGDSSNLFKDSEITAGTSSNFTSSLG
YPLSYYTSTTPPSDNSQILSIINNENEDNGTSNAVTQVTSSDLSEEMIRSFVVGGGNPQH
TQTDAAGSSEVIDPTQVVTAIITDDETNVATPTEKQVIIVTEGAEGEDMVVEDDDYFQDA
GMAGYENGEFMVTLLPNKEDMNVYDASYTGGVTTNEPPLDLQFEVAAEITNLEGQLLRRE
IVTQTTTWRKPRATRKQKQSSYKGEGSLVNNSTNNKQFKCDRCSLKFQQKDMLDIHVKCH
TVLDKVYKCFHCGETHKHWVKMYHHLFSHGIEKPHKCPVCSFSCISKSDLIAHEFVHSKT
KNWTCPKCKRSFKHRRNMVAHERTCPGVDESGKMNPTKNEEKFVCSVCSKQLSNKRNLEK
HFEIHLDVKPFVCDLCGHSTRLKESLIMHKRLHTGEKPFKCDICNYATPDKSSLRRHKRR
HSNEKPYKCSYCGYKCIQKHCLENHIRRKHTGEQFVCGLCHFSTHDRYGLNQHFKQHQNG
GVTSEITQSSAIVNISTDCVVNSAPKEQESTKTDTNMNLNMENVVLQIQPTQENNKSETW
ATASSAMSGSDVLTSNKNLESQEINVEAIAVNAEQHMIQLTGPEGTLLQQIQQPGDLVFI
RENGEILIKKPDGTILLIQQQMDEKDNMEEVSQTPETTA
Nucleotide sequence
Length: 2,405
>KH2012:KH.C3.877.v1.A.SL1-1
GTATTGTTATTTGTTAGAAATATCATAACTCTTCTATGGAGTTTGTGAAGAGTAGTAAAA
CTGAGGTAATGTCAGATCCTGTATTACAAGATCCACACATTATGATACATGGACAAAATG
ATAAGAAAAAAATGGATGAATTCTCACAAAGTACTATTAATTCTGTAGCTAATGATGACT
TAACAGAGGAGCCACCATCCAGTGTGTCTTCCAGCCTTCCCATGTATCTACTAACAACAG
AGGGTAGTGATGGTTGCACACAACGTTATATCGTCAGTGACCCATTTAAAGATTCGGAAA
TTGGTGATTCTTCAAATTTGTTCAAAGACAGTGAAATAACTGCTGGTACTTCATCCAACT
TCACATCAAGCCTTGGTTACCCACTTTCATATTACACCTCTACCACCCCACCTAGTGATA
ATTCACAAATATTATCCATAATTAACAACGAGAACGAAGACAATGGAACAAGCAACGCTG
TTACACAAGTGACCTCATCAGATTTATCGGAAGAAATGATCCGTAGCTTCGTTGTGGGTG
GGGGGAATCCCCAGCATACCCAGACAGACGCCGCGGGGTCAAGTGAGGTCATTGACCCCA
CCCAAGTTGTCACAGCAATTATCACTGATGATGAAACTAATGTTGCGACCCCGACCGAAA
AACAAGTTATAATCGTGACTGAAGGAGCGGAAGGTGAAGATATGGTCGTGGAGGATGACG
ATTATTTCCAAGATGCAGGAATGGCTGGATATGAAAATGGAGAGTTTATGGTCACGTTGC
TTCCTAATAAAGAAGATATGAATGTATATGATGCATCTTATACAGGTGGGGTGACAACAA
ACGAACCTCCGTTAGACCTTCAGTTCGAAGTTGCGGCCGAAATCACTAATTTAGAAGGCC
AACTTCTTCGTCGAGAAATTGTTACTCAAACCACCACTTGGAGGAAACCAAGAGCAACGA
GAAAGCAAAAACAATCCTCATACAAAGGTGAAGGTTCTCTAGTGAATAATTCTACCAATA
ATAAGCAATTTAAATGCGACAGGTGTAGCTTGAAGTTCCAACAAAAAGACATGCTGGATA
TCCATGTTAAATGCCACACAGTGTTGGATAAAGTTTACAAATGTTTCCACTGTGGTGAAA
CACACAAGCATTGGGTTAAGATGTACCACCATCTTTTCAGTCATGGTATAGAGAAGCCAC
ACAAATGTCCAGTGTGTTCTTTCTCATGTATAAGCAAAAGTGACTTAATAGCTCATGAGT
TCGTTCATAGCAAAACTAAGAATTGGACATGTCCCAAATGTAAGCGAAGTTTTAAGCATC
GGCGAAACATGGTCGCGCATGAACGAACTTGTCCTGGGGTCGATGAATCGGGGAAAATGA
ATCCAACGAAGAATGAGGAGAAATTTGTTTGTAGTGTTTGTTCGAAGCAGTTAAGCAATA
AAAGAAATCTTGAAAAACATTTTGAAATTCATCTTGACGTGAAACCTTTTGTTTGTGACT
TGTGTGGTCATTCTACAAGACTCAAGGAGTCGCTAATAATGCACAAGAGATTACACACAG
GAGAAAAACCCTTCAAGTGCGACATATGTAATTATGCAACTCCTGATAAATCTTCATTAA
GACGACATAAACGAAGACACTCAAATGAGAAGCCTTATAAATGTTCCTATTGTGGTTATA
AATGTATCCAGAAACATTGCCTCGAAAACCATATTCGTCGAAAACACACAGGTGAACAGT
TTGTTTGTGGGTTGTGCCATTTCTCAACTCACGATCGATATGGGTTAAACCAGCATTTCA
AACAACATCAGAATGGTGGGGTTACCAGTGAGATTACCCAGTCATCCGCCATTGTTAATA
TTTCAACTGATTGTGTTGTGAATTCCGCACCTAAAGAACAGGAATCAACAAAAACAGACA
CCAACATGAACTTAAATATGGAGAATGTTGTTCTTCAAATCCAACCAACGCAGGAAAACA
ACAAATCTGAAACTTGGGCAACAGCAAGCAGTGCAATGTCGGGCAGTGATGTTCTTACTT
CAAATAAAAATCTTGAATCTCAAGAAATTAATGTTGAAGCTATTGCTGTTAATGCTGAAC
AGCATATGATTCAACTAACTGGACCTGAAGGAACTTTATTACAACAAATACAACAACCTG
GGGACCTTGTATTTATTAGGGAAAATGGTGAAATTTTGATCAAGAAACCCGACGGTACTA
TTTTATTAATCCAACAACAAATGGATGAGAAAGACAACATGGAAGAGGTTTCACAGACAC
CTGAAACAACCGCATAACATGTTCGTAACTTAATGTTGCCGCAATGCATTACCCACTGCC
ATTCTATCACTGTGTTAAGATAATATTGACCTACAATGAAATAAATTCGGAAAATTTGAA
AAAAA
| PANTHER |
Hunchback (IPR027742) - T[329-598] 1.7E-81 - T[460-598] 1.7E-81 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[333-375] 1.73E-5 - T[393-444] 5.55E-10 - T[460-519] 1.94E-12 - T[503-553] 4.04E-17 - T[545-572] 3.63E-6 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[338-361] 9.847 - T[367-394] 9.66 - T[395-422] 8.725 - T[423-450] 9.016 - T[463-490] 11.759 - T[491-518] 14.295 - T[519-546] 13.609 - T[547-575] 11.323 |
| SMART |
Znf_C2H2_type (IPR013087) - T[338-360] 0.58 - T[367-389] 14.0 - T[395-417] 0.015 - T[423-443] 16.0 - T[463-485] 0.011 - T[491-513] 0.086 - T[519-541] 1.1E-4 - T[547-570] 0.039 - T[575-597] 0.2 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[340-360] . - T[397-417] . - T[465-485] . - T[549-570] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN287_HUMAN | 34.043 % | 158 | 2.47E-40 |
| ZN180_HUMAN | 36.948 % | 159 | 6.79E-41 |
| ZN629_HUMAN | 30.33 % | 161 | 4.69E-41 |