- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Clone 'cima882681' >
- Transcript 'KH2012:KH.C4.113.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.113.v1.A.SL1-1
Possible name(s)
CDK12; CDK13; CDK9
Gene model
Location
KhC4 [4,484,871 / 4,488,133]
Amino acid sequence
Length: 390
>KH.C4.113.v1.A.SL1-1
TLSHPVIIRIFSKTMAKGLDPNMDFPFCQDVLKYERITKIGQGTFGEVFKARDRKTDRLV
ALKKVIMENEKEGFPITALREIKILQLLKHENVVDLIEICRTKPTQYNRSKGSIYLVFEF
CAHDLAGLLSNATVKFTLGEIKKTMLQLLEGLFYIHRNKILHRDMKAANILITKNGVLKL
ADFGLARAFSYTKTGQANRYTNRVVTLWYRPPELLLGDRDYGPPIDLWGAGCIMTEMWTR
SPIMQGHTEQQQLTLISQLCGSITKQVWPGVEKYDLFTKMELPTGQKRRVKERLKAYVRD
QYALDLIDKLLSLDPKHRIDSDEALNHDFFWTEPLPCDLTNMLSQHKTSMFEYLAPPRKP
TTSAAHPHYRNPPAQAARQQPTDPAYDRIF
Nucleotide sequence
Length: 1,330
>KH2012:KH.C4.113.v1.A.SL1-1
ATACTTTAAGTCATCCAGTTATAATAAGAATCTTTTCAAAAACAATGGCAAAGGGATTGG
ATCCCAACATGGACTTTCCCTTCTGTCAAGATGTTTTAAAATATGAAAGAATAACCAAAA
TTGGACAAGGAACTTTTGGTGAGGTGTTTAAAGCAAGAGATAGAAAAACTGATCGTCTTG
TTGCACTGAAGAAAGTAATCATGGAGAATGAAAAGGAAGGGTTTCCCATCACTGCGTTAC
GTGAAATAAAGATTCTTCAACTTCTTAAACACGAGAATGTGGTTGACCTTATCGAAATAT
GTCGCACTAAACCTACACAATATAACAGATCAAAAGGATCCATCTACCTAGTATTTGAAT
TCTGTGCTCATGACTTGGCTGGTTTGCTGAGTAATGCTACGGTGAAATTTACACTGGGGG
AAATTAAAAAGACAATGCTCCAATTATTGGAGGGATTATTTTACATTCATCGAAACAAGA
TACTTCATCGAGACATGAAAGCTGCCAATATTCTTATCACCAAAAATGGAGTTCTTAAGT
TGGCTGACTTTGGGTTAGCCAGGGCTTTTAGTTACACGAAAACTGGTCAGGCAAATCGTT
ATACGAATCGTGTCGTAACGTTATGGTATCGACCACCGGAGCTGTTGCTAGGCGACCGTG
ATTATGGGCCACCCATAGACTTATGGGGGGCAGGTTGTATTATGACAGAAATGTGGACTA
GGAGTCCAATTATGCAGGGACACACAGAGCAGCAGCAGTTAACTTTAATCAGTCAACTTT
GTGGTTCTATCACCAAGCAAGTGTGGCCTGGAGTAGAAAAATATGATTTATTCACTAAGA
TGGAACTTCCTACTGGTCAAAAACGAAGAGTGAAAGAAAGATTGAAGGCCTATGTACGAG
ACCAGTACGCGCTCGATTTAATTGATAAATTATTAAGTTTAGACCCGAAACATCGAATCG
ATTCTGACGAAGCACTCAATCATGATTTCTTTTGGACCGAACCTCTCCCATGCGACCTTA
CCAATATGTTGTCTCAACACAAAACATCCATGTTTGAATATCTTGCCCCGCCAAGAAAAC
CAACTACATCAGCCGCTCACCCACACTACAGGAACCCTCCTGCCCAAGCCGCTCGACAGC
AACCAACAGACCCAGCTTACGATCGAATTTTTTAATTTTATTTTGCTTTATTGATTTTTT
AATTTGTTATTTTCGGGAGAAATTTTTTCTTGTAACAGTCATTATCATTTGTTATGTGTT
GGTGAAATTAAACAATTTTTTTATTTCACCGACACTGACTCAAATGATGGGCAATAAACA
TGGTAAACTT
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[33-337] 1.62E-97 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[34-330] 2.4E-71 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[34-330] 44.456 |
| SMART |
Prot_kinase_dom (IPR000719) - T[34-330] 4.4E-90 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[40-63] . |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[160-172] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDK9_HUMAN | 76.177 % | 572 | 0 |
| CDK13_HUMAN | 49.338 % | 288 | 1.89E-87 |
| CDK12_HUMAN | 49.007 % | 293 | 4.94E-89 |