- Transcript 'KH2012:KH.C4.17.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.17.v1.A.SL1-1
Possible name(s)
CADM2; CADM4; NECTIN3
Gene model
Location
KhC4 [687,041 / 695,583]
Amino acid sequence
Length: 459
>KH.C4.17.v1.A.SL1-1
YKPPLKMKLILIQSFLYLCFSCYSTYGEGVVLLSGSTVNGVVTPAPTKTVTVYCDIVGQL
PVDQSYHFTWSVEGEGLISYDDDVVSKGYQSRFIVANSPNEASRLALEINPVKLSDVGKY
DCSIVGLYDHNVISSSFLEVNQLPNITVKVNDLTVVEGNEVILGTCYANASKPQPEIWIE
DSAGHRVESLSSPSIVNHEEHAGVSDSVLKFSKVFNREENGESYRCMVQHPDNLETFSSY
IGQVDVQFSPTVSIMGDESDISMEEGQSLSVVSLTTGNPTPVVVWTFQPDTTQPPATSAD
STNPTDPPTYGLPANFQAAGNTLIGNPLSMIGNDGTFTCTVSNGLGSPASISFHLTITEK
PTTTAAPTTPEATKPLPRQAGADAAVIGGVVAVAVFVLIVAIIFLLRYFMTHKGEYYTNE
LKATDDARLENNPIDDEDDDLDGDEDQPLDERKRTEHFL
Nucleotide sequence
Length: 2,468
>KH2012:KH.C4.17.v1.A.SL1-1
AGACAGGTCCATAGGTGTAACTGTCTGAGTGTGTAGTATAAACCACCATTGAAGATGAAA
TTGATTTTAATTCAATCTTTCCTCTACCTGTGCTTTTCTTGCTACAGTACATATGGTGAA
GGAGTTGTCCTTTTATCTGGTTCAACTGTCAATGGAGTGGTCACCCCTGCACCTACAAAG
ACAGTTACAGTTTACTGTGATATAGTTGGCCAATTACCCGTAGACCAGTCATATCACTTT
ACATGGAGTGTTGAAGGAGAAGGTCTTATATCATATGACGATGATGTTGTTTCGAAAGGT
TACCAATCCAGGTTTATTGTTGCCAACTCGCCAAACGAGGCAAGCAGGTTAGCTCTTGAA
ATAAATCCTGTCAAGTTGAGTGATGTAGGAAAATACGATTGCTCAATTGTGGGATTATAT
GACCACAATGTTATTTCTTCATCATTCTTGGAAGTTAATCAGTTACCAAATATTACTGTG
AAAGTGAACGATTTGACGGTGGTAGAAGGTAATGAAGTAATCCTTGGTACTTGCTATGCT
AATGCTTCAAAACCTCAACCAGAAATATGGATTGAAGACTCTGCTGGCCACCGAGTTGAA
AGTTTATCTTCTCCAAGCATTGTAAACCATGAAGAACACGCTGGGGTCTCTGACTCTGTG
CTTAAGTTCAGCAAAGTATTTAACAGAGAAGAAAATGGAGAAAGTTACCGATGTATGGTG
CAACACCCGGATAACCTGGAAACATTTTCATCTTATATTGGACAAGTAGATGTGCAGTTT
TCTCCAACTGTTTCTATTATGGGGGATGAAAGTGATATTTCAATGGAAGAAGGTCAATCA
CTTTCTGTTGTAAGTTTAACAACTGGTAACCCCACGCCAGTGGTTGTGTGGACATTCCAA
CCAGACACCACACAACCACCAGCCACCTCAGCAGATTCAACCAACCCCACTGACCCACCA
ACATATGGCTTACCTGCAAACTTCCAAGCTGCTGGAAACACCCTCATTGGAAATCCACTA
TCAATGATTGGAAATGATGGAACATTCACATGCACTGTCAGTAATGGATTAGGTTCACCA
GCTTCTATTTCATTTCATCTAACTATTACTGAAAAACCAACAACTACTGCTGCCCCAACA
ACACCAGAAGCAACAAAACCATTGCCAAGACAAGCAGGGGCAGATGCTGCAGTGATTGGA
GGAGTTGTCGCTGTTGCTGTTTTTGTACTCATCGTGGCTATCATTTTTCTACTTCGTTAT
TTCATGACACATAAAGGTGAATATTACACTAATGAATTAAAAGCAACCGATGATGCACGA
CTTGAAAACAATCCCATCGATGATGAAGATGATGATCTTGATGGGGATGAAGACCAACCA
CTAGATGAACGAAAAAGAACTGAGCACTTCCTGTAGTAGCCAGACATTGACTTGTGCCCT
GCCACAATGATTGCATGAACTACACCACAACACACAAGTGCCTTATGTATACAAAGACCA
AATGCCGAAATAAACAATTGGGTTTTATACTGACAAGAAACAATTATGTTGAGTGATTTT
AAACTCGAATATTTATATTGCACAAAATGATATTGAGTTTTTGTTCAATCCTGTTAACGT
TTTTATTATGAATGCTATTTCATATAAAATTTGTGTATACCGCTTTGTTATTATCATTGT
TTTACAAAGTTTCAAATCGACCAATGTGTGCGATCGTGTTTTTGCACCAACTTATTTTTA
CTGCGGATGCATGAGGCACCAGTTGTTTTCACCAGGTGCTAACAATTATCTTTTGGTACT
TTGTCATATTTGGTTATTTTTAATAATTTTAGCTTTTTGAATCATTGTGATTAAGAATGC
ATTGTACATAGCAAGCTTTTTTATTTTATGCTGTATGTTAAGGACTACATGTTTAATTAG
TCCAGCACTTGATGTTTTTATCATCATGCGTCACTCCAGGATCACCTAAAGTTTCACAGC
GTTGATATGAACCAAATCAGCACTCTGCATTCTGTAATACTTCAGCGCACCTAGATTTAG
ACATTTAATAATTATGCGTGGTTATGAAATCGTGCTTTTTAGCAATAAATTGGTTTTGAC
TATTCATTAGTTGCGTGCATTCAAAATTGTCCTTATTCTCTGGAAATATTAAATTTGCTG
TATTTTATCACTACAGTATTTCTTTAAAGTGTGGACACATTTGAGCACTACTCTTATACC
CAAGTCCGACTCTTCTTATACCATTATTATTATTTATCGTGTTTGAAACATTGTTTTTAC
TAGTGTAAAACGTGCTTACTCATAGCCTAGCTCTCTTATTTGTATGAACTCGGCCATTGC
GTCGTGGTCCCACTGTCCCAGTATTCTAGTTGGAAAGAAATCGAAAATGGTCGCTGAAAA
TAATCTTTGGTGTACTGTGTACTAAATTTACTTTCTTTCATCAAAACATTACTACGTTTA
CGTTGTAG
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[3-134] 8.393 - T[144-238] 9.174 - T[250-352] 9.119 |
| SMART |
Ig_sub (IPR003599) - T[39-141] 0.0072 - T[258-358] 84.0 |
| Gene3D |
Ig-like_fold (IPR013783) - T[41-140] 1.9E-8 - T[142-249] 2.6E-9 - T[250-364] 3.9E-8 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[42-144] 2.52E-8 - T[257-364] 7.16E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CADM2_HUMAN | 25.229 % | 84.3 | 1.56E-17 |