- Transcript 'KH2012:KH.C4.17.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.17.v2.A.SL1-1
Possible name(s)
CADM2; CADM4; NECTIN3
Gene model
Location
KhC4 [687,041 / 695,583]
Amino acid sequence
Length: 483
>KH.C4.17.v2.A.SL1-1
YKPPLKMKLILIQSFLYLCFSCYSTYGYPTTSMPGVEDQDKVLGPAPACQSEGVVLLSGS
TVNGVVTPAPTKTVTVYCDIVGQLPVDQSYHFTWSVEGEGLISYDDDVVSKGYQSRFIVA
NSPNEASRLALEINPVKLSDVGKYDCSIVGLYDHNVISSSFLEVNQLPNITVKVNDLTVV
EGNEVILGTCYANASKPQPEIWIEDSAGHRVESLSSPSIVNHEEHAGVSDSVLKFSKVFN
REENGESYRCMVQHPDNLETFSSYIGQVDVQFSPTVSIMGDESDISMEEGQSLSVVSLTT
GNPTPVVVWTFQPDTTQPPATSADSTNPTDPPTYGLPANFQAAGNTLIGNPLSMIGNDGT
FTCTVSNGLGSPASISFHLTITEKPTTTAAPTTPEATKPLPRQAGADAAVIGGVVAVAVF
VLIVAIIFLLRYFMTHKGEYYTNELKATDDARLENNPIDDEDDDLDGDEDQPLDERKRTE
HFL
Nucleotide sequence
Length: 2,540
>KH2012:KH.C4.17.v2.A.SL1-1
AGACAGGTCCATAGGTGTAACTGTCTGAGTGTGTAGTATAAACCACCATTGAAGATGAAA
TTGATTTTAATTCAATCTTTCCTCTACCTGTGCTTTTCTTGCTACAGTACATATGGCTAC
CCAACAACGTCCATGCCAGGTGTCGAAGATCAAGACAAAGTGCTAGGTCCCGCACCCGCC
TGTCAAAGTGAAGGAGTTGTCCTTTTATCTGGTTCAACTGTCAATGGAGTGGTCACCCCT
GCACCTACAAAGACAGTTACAGTTTACTGTGATATAGTTGGCCAATTACCCGTAGACCAG
TCATATCACTTTACATGGAGTGTTGAAGGAGAAGGTCTTATATCATATGACGATGATGTT
GTTTCGAAAGGTTACCAATCCAGGTTTATTGTTGCCAACTCGCCAAACGAGGCAAGCAGG
TTAGCTCTTGAAATAAATCCTGTCAAGTTGAGTGATGTAGGAAAATACGATTGCTCAATT
GTGGGATTATATGACCACAATGTTATTTCTTCATCATTCTTGGAAGTTAATCAGTTACCA
AATATTACTGTGAAAGTGAACGATTTGACGGTGGTAGAAGGTAATGAAGTAATCCTTGGT
ACTTGCTATGCTAATGCTTCAAAACCTCAACCAGAAATATGGATTGAAGACTCTGCTGGC
CACCGAGTTGAAAGTTTATCTTCTCCAAGCATTGTAAACCATGAAGAACACGCTGGGGTC
TCTGACTCTGTGCTTAAGTTCAGCAAAGTATTTAACAGAGAAGAAAATGGAGAAAGTTAC
CGATGTATGGTGCAACACCCGGATAACCTGGAAACATTTTCATCTTATATTGGACAAGTA
GATGTGCAGTTTTCTCCAACTGTTTCTATTATGGGGGATGAAAGTGATATTTCAATGGAA
GAAGGTCAATCACTTTCTGTTGTAAGTTTAACAACTGGTAACCCCACGCCAGTGGTTGTG
TGGACATTCCAACCAGACACCACACAACCACCAGCCACCTCAGCAGATTCAACCAACCCC
ACTGACCCACCAACATATGGCTTACCTGCAAACTTCCAAGCTGCTGGAAACACCCTCATT
GGAAATCCACTATCAATGATTGGAAATGATGGAACATTCACATGCACTGTCAGTAATGGA
TTAGGTTCACCAGCTTCTATTTCATTTCATCTAACTATTACTGAAAAACCAACAACTACT
GCTGCCCCAACAACACCAGAAGCAACAAAACCATTGCCAAGACAAGCAGGGGCAGATGCT
GCAGTGATTGGAGGAGTTGTCGCTGTTGCTGTTTTTGTACTCATCGTGGCTATCATTTTT
CTACTTCGTTATTTCATGACACATAAAGGTGAATATTACACTAATGAATTAAAAGCAACC
GATGATGCACGACTTGAAAACAATCCCATCGATGATGAAGATGATGATCTTGATGGGGAT
GAAGACCAACCACTAGATGAACGAAAAAGAACTGAGCACTTCCTGTAGTAGCCAGACATT
GACTTGTGCCCTGCCACAATGATTGCATGAACTACACCACAACACACAAGTGCCTTATGT
ATACAAAGACCAAATGCCGAAATAAACAATTGGGTTTTATACTGACAAGAAACAATTATG
TTGAGTGATTTTAAACTCGAATATTTATATTGCACAAAATGATATTGAGTTTTTGTTCAA
TCCTGTTAACGTTTTTATTATGAATGCTATTTCATATAAAATTTGTGTATACCGCTTTGT
TATTATCATTGTTTTACAAAGTTTCAAATCGACCAATGTGTGCGATCGTGTTTTTGCACC
AACTTATTTTTACTGCGGATGCATGAGGCACCAGTTGTTTTCACCAGGTGCTAACAATTA
TCTTTTGGTACTTTGTCATATTTGGTTATTTTTAATAATTTTAGCTTTTTGAATCATTGT
GATTAAGAATGCATTGTACATAGCAAGCTTTTTTATTTTATGCTGTATGTTAAGGACTAC
ATGTTTAATTAGTCCAGCACTTGATGTTTTTATCATCATGCGTCACTCCAGGATCACCTA
AAGTTTCACAGCGTTGATATGAACCAAATCAGCACTCTGCATTCTGTAATACTTCAGCGC
ACCTAGATTTAGACATTTAATAATTATGCGTGGTTATGAAATCGTGCTTTTTAGCAATAA
ATTGGTTTTGACTATTCATTAGTTGCGTGCATTCAAAATTGTCCTTATTCTCTGGAAATA
TTAAATTTGCTGTATTTTATCACTACAGTATTTCTTTAAAGTGTGGACACATTTGAGCAC
TACTCTTATACCCAAGTCCGACTCTTCTTATACCATTATTATTATTTATCGTGTTTGAAA
CATTGTTTTTACTAGTGTAAAACGTGCTTACTCATAGCCTAGCTCTCTTATTTGTATGAA
CTCGGCCATTGCGTCGTGGTCCCACTGTCCCAGTATTCTAGTTGGAAAGAAATCGAAAAT
GGTCGCTGAAAATAATCTTTGGTGTACTGTGTACTAAATTTACTTTCTTTCATCAAAACA
TTACTACGTTTACGTTGTAG
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[45-158] 8.774 - T[168-262] 9.174 - T[274-376] 9.119 |
| SMART |
Ig_sub (IPR003599) - T[63-165] 0.0072 - T[282-382] 84.0 |
| Gene3D |
Ig-like_fold (IPR013783) - T[65-164] 2.1E-8 - T[166-273] 2.9E-9 - T[274-388] 4.3E-8 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[66-168] 2.66E-8 - T[281-388] 7.84E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CADM2_HUMAN | 24.828 % | 84 | 2.17E-17 |