- Clone 'AJ493812' >
- Transcript 'KH2012:KH.C4.236.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.236.v1.A.SL1-1
Possible name(s)
EHF; ELF3; ELF5
Gene model
Location
KhC4 [2,978,673 / 2,987,935]
Amino acid sequence
Length: 1,009
>KH.C4.236.v1.A.SL1-1
PSGEYPCVTDTVLCDVMDDVIAHFDHDYVINQKCPASVVYSGDTKKRQMTRPLSIQRSAL
VRHLRKGNLPSSKFQSRDLEQHALSAVDVVTEKSPNTGTTTVRFETLPSMSTSNKTTTNS
QRVTVTSSTTTNPTLPGNLATLSSSEFAQILKSFNIRLKTDDSGLAVLKTNRTTSTASGR
SGGVSNPPAQTTSVKSDSVLKPPMAGLGKTTWRGLKWHHTNFNHAPKPKAATTPRRRRTV
PKRALDPMKLGQARTPKFPGYAVPLSQAWVDLANRDLAAEETVRSSVQSESEKLLLGDED
NKHDPFLSNFTEHDENAESVVLTSQLKPCQTRSESDVTSDQSEISDTFLRVDDITLDGEY
LRPSTTLVSDVNKQAPVIASESRTQSHGTDDSPLLRAGLFRCRRTTAETTLGTPHALTDD
VTHPGSKELGGNMAEDECRLKSADETDFQEKEVTDKMADYIESHQQYNRQGAGYIPSTQS
CSEAPEIGTYRIFEDLFGENSKLMDMHDVTDTMLSNSLSFFASDYDVTNSNQAVAVNREF
DHAASESRNELRGFDFCNPDEVFVSSMQTMPDQNCHVSHQQMTSPQVDVFLTSPKSIPAS
YVTSGSQATLSDTDSGIHSPSSTPMKTYQQNTSFDLDSHWNNYSVQRDAHPSEIGSPTNI
DHEIFFNSPTPSYSSSTYSTDTDQESHFINLDDQAAFTNEPIGGQDSCRNEQQTIQTCKT
YQFCDNFGQIDAGPIVLRKLYPDEAGRWTATTEPHISNHRSNIVFRTSRKIKKETSTERK
RKITSDVSDDRLVKAKRISAGKNVHLWEFIRDILLDPEHSPSLIKWEDRQSGVFRFMQSD
VVASMWGERKRNPKMTYEKLSRAMRYYYNRGILERVDGRRLVYKFGPNSHGWQLSGKIKQ
TPTNVVKSEHADTSNDTVCASPIDSDSIAVVVSGEQTFQGGNETTEIPQTSPSSLDTCNA
LPNTSKYTNIVTSWLQSTSSSCTSSQITSLPSANVLLGNSIRIAAIQAQ
Nucleotide sequence
Length: 3,780
>KH2012:KH.C4.236.v1.A.SL1-1
ATATTTAGTTGATTAGATGATAACCTATTGACCATGTGTAGGTGCATGTACAATAACCAT
CAGGTGAATACCCGTGTGTGACCGACACTGTCCTCTGTGACGTCATGGATGACGTCATCG
CGCACTTTGACCATGACTATGTCATCAATCAGAAGTGTCCTGCTAGTGTTGTATACAGTG
GTGATACGAAGAAGAGGCAAATGACTCGACCCCTATCGATCCAACGATCCGCCCTAGTGA
GACACCTTAGAAAAGGAAATTTACCTAGCTCCAAATTTCAATCACGTGATCTAGAACAGC
ACGCGTTAAGCGCTGTTGATGTCGTAACGGAAAAATCCCCGAATACGGGAACCACGACCG
TTCGCTTCGAAACGTTGCCAAGCATGTCTACCTCAAACAAAACAACAACCAATTCACAAC
GTGTTACCGTTACGTCATCTACGACAACGAATCCAACGCTTCCCGGCAACTTGGCTACGC
TTTCGTCGTCAGAGTTCGCGCAGATTCTTAAAAGTTTCAACATCAGGTTAAAAACCGATG
ACTCAGGGCTCGCCGTGCTTAAAACAAACCGAACAACTTCAACCGCCAGTGGGCGGTCTG
GAGGCGTAAGCAACCCTCCGGCTCAAACCACCTCGGTTAAAAGTGACTCCGTGTTAAAGC
CCCCGATGGCCGGCTTAGGTAAAACAACGTGGCGAGGGCTTAAGTGGCATCATACTAATT
TTAACCACGCTCCAAAACCAAAAGCTGCGACTACACCTAGACGTAGAAGAACTGTTCCAA
AGCGTGCCTTGGATCCGATGAAACTTGGTCAGGCACGAACTCCTAAGTTCCCGGGGTATG
CCGTGCCGCTTTCACAAGCGTGGGTGGATCTTGCAAATCGAGACCTGGCTGCGGAGGAGA
CCGTTCGGTCATCCGTGCAGTCTGAAAGTGAGAAACTTCTTCTGGGCGACGAAGACAACA
AACATGATCCGTTCCTTTCCAACTTTACTGAGCACGATGAGAATGCAGAATCTGTTGTGT
TGACATCACAATTAAAGCCTTGTCAAACGAGGTCGGAAAGTGACGTCACTTCCGACCAAA
GCGAAATTTCCGACACGTTTTTACGAGTGGACGATATTACGCTTGATGGGGAATACCTAA
GGCCGTCAACGACCCTCGTTTCTGACGTAAACAAGCAAGCACCGGTGATTGCATCAGAAA
GTCGCACGCAGAGTCACGGCACGGACGATTCGCCTTTGCTGCGTGCCGGGCTGTTTAGGT
GCCGACGTACAACAGCCGAAACGACCCTTGGCACGCCTCATGCACTTACTGATGACGTAA
CGCATCCCGGCAGTAAAGAATTGGGAGGAAATATGGCGGAAGACGAGTGTAGGTTAAAAA
GTGCCGACGAAACGGATTTTCAAGAAAAAGAGGTAACTGACAAAATGGCCGATTACATTG
AATCGCACCAGCAATACAATAGACAAGGTGCTGGATACATTCCAAGCACGCAGAGCTGCA
GTGAAGCACCGGAGATAGGAACGTACAGGATTTTCGAAGATTTGTTCGGAGAAAACTCCA
AACTGATGGACATGCATGATGTTACTGATACCATGCTAAGCAATTCACTTTCGTTCTTCG
CATCCGACTACGACGTAACCAACTCCAACCAAGCGGTCGCAGTCAACAGAGAATTTGACC
ACGCAGCAAGCGAGTCACGAAACGAACTAAGAGGTTTTGATTTCTGTAACCCGGACGAAG
TTTTTGTAAGCTCAATGCAAACAATGCCTGATCAAAATTGCCACGTATCGCACCAACAAA
TGACGTCACCACAAGTCGACGTATTTCTTACGTCACCAAAGTCAATTCCTGCCAGTTACG
TCACGTCTGGTTCCCAAGCAACGCTCTCGGACACCGACAGTGGTATCCATAGTCCCAGCT
CGACCCCTATGAAAACCTATCAACAAAACACATCGTTTGACTTGGATTCTCACTGGAACA
ACTACAGCGTCCAAAGAGACGCACATCCCAGTGAAATCGGTAGCCCAACAAATATTGACC
ATGAGATTTTTTTCAACTCGCCAACACCCAGTTACTCAAGCAGCACGTACTCAACGGATA
CAGATCAAGAATCACATTTTATCAACCTGGACGATCAAGCTGCTTTTACCAATGAACCTA
TAGGCGGACAGGACTCTTGTCGAAATGAACAACAGACCATCCAGACATGCAAAACATACC
AATTCTGTGATAATTTTGGCCAAATTGACGCAGGTCCAATCGTGCTAAGAAAACTATATC
CAGACGAAGCAGGTCGCTGGACTGCAACCACCGAACCACACATTTCCAACCATAGAAGTA
ACATTGTCTTCCGGACTTCTCGGAAGATAAAGAAAGAAACAAGTACCGAGCGTAAACGGA
AGATTACATCCGACGTTTCGGATGACAGATTGGTGAAAGCAAAAAGAATATCGGCAGGCA
AGAACGTGCACTTGTGGGAATTTATTCGGGACATTCTACTCGACCCCGAACACAGCCCAT
CACTGATAAAATGGGAGGACCGCCAATCCGGAGTGTTTAGATTCATGCAGAGTGATGTGG
TGGCATCGATGTGGGGAGAAAGGAAACGAAATCCGAAAATGACTTATGAAAAATTAAGCC
GAGCAATGAGGTATTACTACAACCGTGGTATACTGGAACGAGTTGACGGAAGAAGACTTG
TTTACAAGTTTGGTCCGAATTCACATGGCTGGCAACTCTCGGGTAAAATTAAGCAAACGC
CAACAAATGTTGTGAAGAGTGAACATGCCGACACGTCAAACGACACGGTATGCGCATCAC
CAATTGACAGCGATTCCATTGCTGTCGTCGTCTCGGGTGAGCAAACCTTCCAAGGCGGGA
ATGAAACGACCGAAATCCCGCAAACTTCCCCCAGCTCCCTTGATACCTGCAACGCTCTTC
CTAACACTTCCAAATATACAAACATTGTAACATCGTGGCTGCAGAGCACGTCATCCTCGT
GTACGTCATCACAGATTACATCACTGCCGAGCGCAAACGTACTTCTCGGAAACAGCATTC
GAATTGCCGCCATACAGGCGCAGTGAACGGACATTTTTAAATTGACTTTTTTGTAGCTAT
AAGATAATGGACAGCCACACACTGTATACGTCAAAAATTTGCCGGTGCACGCCAAGCGAG
CCAAATTATTCTACTTAAATAATATTACACAGACTTTCGGCGGCGGTTTATATTTCGATC
ACCCAAAAACAGCATACATGATTGACGGTTTGATAATATTGCCCACCAATACATTATCGA
CCATGACACCGCAGGTCAATCCCGTATATCATTCTCACTAGGGAGCCACGAAATTTCAAT
GTCCGTGACAACGGATTTCATCGCCTCCACTGTATAAACTTAGGTATTTCCAAAATTTGA
CCATTTCTCCTCACTAACTGAGTATAAGATCACCAAGAGAGTTGGTGTCTTTATTTTATG
AAATTCACTGTAGCCCACACATTGTGTTAAACGATGAGCAGTCCTGTTTTGTACGAACTG
TTTCATTAGACTGTGCCACATGATTGACATATCTACCAAGGAGTCTTTTTAACGAAACTT
TTTCTGATCTGTGCGTTCACTCTGGTGTCTTCCCAGCCCGTTTTTCATTCAATGCGTTGT
CAGTTTGATGCCTTACTTAAATACGCCCGGCTATTGCGATTTTGACGCCAATTGTTTTCT
TTTATTTGCGCCCATTAAACAGTAGTATCGTTTCTGTACATTAAAAATGGTAAAAAAAAG
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[764-900] 8.3E-37 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[802-952] 1.94E-38 |
| SMART |
Ets_dom (IPR000418) - T[803-890] 3.6E-49 |
| ProSiteProfiles |
Ets_dom (IPR000418) - T[804-886] 26.453 |
| PRINTS |
Ets_dom (IPR000418) - T[804-817] 1.7E-21 - T[830-848] 1.7E-21 - T[849-867] 1.7E-21 - T[868-886] 1.7E-21 |
| Pfam |
Ets_dom (IPR000418) - T[805-885] 4.8E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EHF_HUMAN | 70.652 % | 154 | 1.69E-41 |
| ELF3_HUMAN | 60 % | 152 | 3.06E-40 |
| ELF5_HUMAN | 66.292 % | 145 | 1.08E-38 |