- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C4.236.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.236.v1.A.SL2-1
Possible name(s)
EHF; ELF3; ELF5
Gene model
Location
KhC4 [2,978,673 / 2,987,894]
Amino acid sequence
Length: 1,009
>KH.C4.236.v1.A.SL2-1
PSGEYPCVTDTVLCDVMDDVIAHFDHDYVINQKCPASVVYSGDTKKRQMTRPLSIQRSAL
VRHLRKGNLPSSKFQSRDLEQHALSAVDVVTEKSPNTGTTTVRFETLPSMSTSNKTTTNS
QRVTVTSSTTTNPTLPGNLATLSSSEFAQILKSFNIRLKTDDSGLAVLKTNRTTSTASGR
SGGVSNPPAQTTSVKSDSVLKPPMAGLGKTTWRGLKWHHTNFNHAPKPKAATTPRRRRTV
PKRALDPMKLGQARTPKFPGYAVPLSQAWVDLANRDLAAEETVRSSVQSESEKLLLGDED
NKHDPFLSNFTEHDENAESVVLTSQLKPCQTRSESDVTSDQSEISDTFLRVDDITLDGEY
LRPSTTLVSDVNKQAPVIASESRTQSHGTDDSPLLRAGLFRCRRTTAETTLGTPHALTDD
VTHPGSKELGGNMAEDECRLKSADETDFQEKEVTDKMADYIESHQQYNRQGAGYIPSTQS
CSEAPEIGTYRIFEDLFGENSKLMDMHDVTDTMLSNSLSFFASDYDVTNSNQAVAVNREF
DHAASESRNELRGFDFCNPDEVFVSSMQTMPDQNCHVSHQQMTSPQVDVFLTSPKSIPAS
YVTSGSQATLSDTDSGIHSPSSTPMKTYQQNTSFDLDSHWNNYSVQRDAHPSEIGSPTNI
DHEIFFNSPTPSYSSSTYSTDTDQESHFINLDDQAAFTNEPIGGQDSCRNEQQTIQTCKT
YQFCDNFGQIDAGPIVLRKLYPDEAGRWTATTEPHISNHRSNIVFRTSRKIKKETSTERK
RKITSDVSDDRLVKAKRISAGKNVHLWEFIRDILLDPEHSPSLIKWEDRQSGVFRFMQSD
VVASMWGERKRNPKMTYEKLSRAMRYYYNRGILERVDGRRLVYKFGPNSHGWQLSGKIKQ
TPTNVVKSEHADTSNDTVCASPIDSDSIAVVVSGEQTFQGGNETTEIPQTSPSSLDTCNA
LPNTSKYTNIVTSWLQSTSSSCTSSQITSLPSANVLLGNSIRIAAIQAQ
Nucleotide sequence
Length: 3,739
>KH2012:KH.C4.236.v1.A.SL2-1
GTGCATGTACAATAACCATCAGGTGAATACCCGTGTGTGACCGACACTGTCCTCTGTGAC
GTCATGGATGACGTCATCGCGCACTTTGACCATGACTATGTCATCAATCAGAAGTGTCCT
GCTAGTGTTGTATACAGTGGTGATACGAAGAAGAGGCAAATGACTCGACCCCTATCGATC
CAACGATCCGCCCTAGTGAGACACCTTAGAAAAGGAAATTTACCTAGCTCCAAATTTCAA
TCACGTGATCTAGAACAGCACGCGTTAAGCGCTGTTGATGTCGTAACGGAAAAATCCCCG
AATACGGGAACCACGACCGTTCGCTTCGAAACGTTGCCAAGCATGTCTACCTCAAACAAA
ACAACAACCAATTCACAACGTGTTACCGTTACGTCATCTACGACAACGAATCCAACGCTT
CCCGGCAACTTGGCTACGCTTTCGTCGTCAGAGTTCGCGCAGATTCTTAAAAGTTTCAAC
ATCAGGTTAAAAACCGATGACTCAGGGCTCGCCGTGCTTAAAACAAACCGAACAACTTCA
ACCGCCAGTGGGCGGTCTGGAGGCGTAAGCAACCCTCCGGCTCAAACCACCTCGGTTAAA
AGTGACTCCGTGTTAAAGCCCCCGATGGCCGGCTTAGGTAAAACAACGTGGCGAGGGCTT
AAGTGGCATCATACTAATTTTAACCACGCTCCAAAACCAAAAGCTGCGACTACACCTAGA
CGTAGAAGAACTGTTCCAAAGCGTGCCTTGGATCCGATGAAACTTGGTCAGGCACGAACT
CCTAAGTTCCCGGGGTATGCCGTGCCGCTTTCACAAGCGTGGGTGGATCTTGCAAATCGA
GACCTGGCTGCGGAGGAGACCGTTCGGTCATCCGTGCAGTCTGAAAGTGAGAAACTTCTT
CTGGGCGACGAAGACAACAAACATGATCCGTTCCTTTCCAACTTTACTGAGCACGATGAG
AATGCAGAATCTGTTGTGTTGACATCACAATTAAAGCCTTGTCAAACGAGGTCGGAAAGT
GACGTCACTTCCGACCAAAGCGAAATTTCCGACACGTTTTTACGAGTGGACGATATTACG
CTTGATGGGGAATACCTAAGGCCGTCAACGACCCTCGTTTCTGACGTAAACAAGCAAGCA
CCGGTGATTGCATCAGAAAGTCGCACGCAGAGTCACGGCACGGACGATTCGCCTTTGCTG
CGTGCCGGGCTGTTTAGGTGCCGACGTACAACAGCCGAAACGACCCTTGGCACGCCTCAT
GCACTTACTGATGACGTAACGCATCCCGGCAGTAAAGAATTGGGAGGAAATATGGCGGAA
GACGAGTGTAGGTTAAAAAGTGCCGACGAAACGGATTTTCAAGAAAAAGAGGTAACTGAC
AAAATGGCCGATTACATTGAATCGCACCAGCAATACAATAGACAAGGTGCTGGATACATT
CCAAGCACGCAGAGCTGCAGTGAAGCACCGGAGATAGGAACGTACAGGATTTTCGAAGAT
TTGTTCGGAGAAAACTCCAAACTGATGGACATGCATGATGTTACTGATACCATGCTAAGC
AATTCACTTTCGTTCTTCGCATCCGACTACGACGTAACCAACTCCAACCAAGCGGTCGCA
GTCAACAGAGAATTTGACCACGCAGCAAGCGAGTCACGAAACGAACTAAGAGGTTTTGAT
TTCTGTAACCCGGACGAAGTTTTTGTAAGCTCAATGCAAACAATGCCTGATCAAAATTGC
CACGTATCGCACCAACAAATGACGTCACCACAAGTCGACGTATTTCTTACGTCACCAAAG
TCAATTCCTGCCAGTTACGTCACGTCTGGTTCCCAAGCAACGCTCTCGGACACCGACAGT
GGTATCCATAGTCCCAGCTCGACCCCTATGAAAACCTATCAACAAAACACATCGTTTGAC
TTGGATTCTCACTGGAACAACTACAGCGTCCAAAGAGACGCACATCCCAGTGAAATCGGT
AGCCCAACAAATATTGACCATGAGATTTTTTTCAACTCGCCAACACCCAGTTACTCAAGC
AGCACGTACTCAACGGATACAGATCAAGAATCACATTTTATCAACCTGGACGATCAAGCT
GCTTTTACCAATGAACCTATAGGCGGACAGGACTCTTGTCGAAATGAACAACAGACCATC
CAGACATGCAAAACATACCAATTCTGTGATAATTTTGGCCAAATTGACGCAGGTCCAATC
GTGCTAAGAAAACTATATCCAGACGAAGCAGGTCGCTGGACTGCAACCACCGAACCACAC
ATTTCCAACCATAGAAGTAACATTGTCTTCCGGACTTCTCGGAAGATAAAGAAAGAAACA
AGTACCGAGCGTAAACGGAAGATTACATCCGACGTTTCGGATGACAGATTGGTGAAAGCA
AAAAGAATATCGGCAGGCAAGAACGTGCACTTGTGGGAATTTATTCGGGACATTCTACTC
GACCCCGAACACAGCCCATCACTGATAAAATGGGAGGACCGCCAATCCGGAGTGTTTAGA
TTCATGCAGAGTGATGTGGTGGCATCGATGTGGGGAGAAAGGAAACGAAATCCGAAAATG
ACTTATGAAAAATTAAGCCGAGCAATGAGGTATTACTACAACCGTGGTATACTGGAACGA
GTTGACGGAAGAAGACTTGTTTACAAGTTTGGTCCGAATTCACATGGCTGGCAACTCTCG
GGTAAAATTAAGCAAACGCCAACAAATGTTGTGAAGAGTGAACATGCCGACACGTCAAAC
GACACGGTATGCGCATCACCAATTGACAGCGATTCCATTGCTGTCGTCGTCTCGGGTGAG
CAAACCTTCCAAGGCGGGAATGAAACGACCGAAATCCCGCAAACTTCCCCCAGCTCCCTT
GATACCTGCAACGCTCTTCCTAACACTTCCAAATATACAAACATTGTAACATCGTGGCTG
CAGAGCACGTCATCCTCGTGTACGTCATCACAGATTACATCACTGCCGAGCGCAAACGTA
CTTCTCGGAAACAGCATTCGAATTGCCGCCATACAGGCGCAGTGAACGGACATTTTTAAA
TTGACTTTTTTGTAGCTATAAGATAATGGACAGCCACACACTGTATACGTCAAAAATTTG
CCGGTGCACGCCAAGCGAGCCAAATTATTCTACTTAAATAATATTACACAGACTTTCGGC
GGCGGTTTATATTTCGATCACCCAAAAACAGCATACATGATTGACGGTTTGATAATATTG
CCCACCAATACATTATCGACCATGACACCGCAGGTCAATCCCGTATATCATTCTCACTAG
GGAGCCACGAAATTTCAATGTCCGTGACAACGGATTTCATCGCCTCCACTGTATAAACTT
AGGTATTTCCAAAATTTGACCATTTCTCCTCACTAACTGAGTATAAGATCACCAAGAGAG
TTGGTGTCTTTATTTTATGAAATTCACTGTAGCCCACACATTGTGTTAAACGATGAGCAG
TCCTGTTTTGTACGAACTGTTTCATTAGACTGTGCCACATGATTGACATATCTACCAAGG
AGTCTTTTTAACGAAACTTTTTCTGATCTGTGCGTTCACTCTGGTGTCTTCCCAGCCCGT
TTTTCATTCAATGCGTTGTCAGTTTGATGCCTTACTTAAATACGCCCGGCTATTGCGATT
TTGACGCCAATTGTTTTCTTTTATTTGCGCCCATTAAACAGTAGTATCGTTTCTGTACAT
TAAAAATGGTAAAAAAAAG
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[764-900] 8.3E-37 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[802-952] 1.94E-38 |
| SMART |
Ets_dom (IPR000418) - T[803-890] 3.6E-49 |
| ProSiteProfiles |
Ets_dom (IPR000418) - T[804-886] 26.453 |
| PRINTS |
Ets_dom (IPR000418) - T[804-817] 1.7E-21 - T[830-848] 1.7E-21 - T[849-867] 1.7E-21 - T[868-886] 1.7E-21 |
| Pfam |
Ets_dom (IPR000418) - T[805-885] 4.8E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EHF_HUMAN | 70.652 % | 154 | 1.69E-41 |
| ELF3_HUMAN | 60 % | 152 | 3.06E-40 |
| ELF5_HUMAN | 66.292 % | 145 | 1.08E-38 |