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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R2.2...' > 
  2. Clone 'AHC0AAA240YE08' > 
  3. Transcript 'KH2012:KH.C4.264.v2....'

Transcript Model

Transcript Id

KH2012:KH.C4.264.v2.A.SL1-1

Possible name(s)

CARF; TCF19

Gene model

KH2012:KH.C4.264

Location

KhC4 [3,801,454 / 3,803,767]

Sequences

Amino acid sequence

Length: 586

>KH.C4.264.v2.A.SL1-1
VAPHQRSLGSKKKLISKFIKTNLDTNKDLVKCTLFRMTFPDAGDHHGHEIGKVQLGTVTN
LNRLVLKYLKEIIAKGNSSVPELKQLVDKYVVEELFKDRTPPPPTNRIFYPTNRTIRNHL
YTAGIKATPQPRCKRKSKQALLPLESSNTDNFDILIDATEVIQDKSVQTNRMLELIDTIK
KEMYNVTSIDALVQAEDLLHTALQVLKNSCVDPVVRDEMVVSDEMVATSIQGKRKMFPVS
NSEGPQSKFQKIYEDILVGTSQPQVFTSDSDQLTLHTNPGVNIVVKTQDKIKSTLQKKGS
LTKIVPSINLMGLNVNQPLLKIGQDTLSYVQLMTLEKSVNAVDRNCLRSFDETFQDGKLC
DNIINSYLWQLTSRYNHVIHADTSVGYRIQHGEDVGQLWENVKKNEKSYAFIPWKSNGQY
WVMIAINIKERKLLYLDPNQTDDIDKTQYIYEAKEFINRSLSDILGFSLTSSATNVHKPN
KGNMSPGIYVCMYAYWLTKGMSLVQPHKPVLFRKHIFDTIVGNCTLGFQNKDNCKVCHKN
IRHITGNSTLWVECSSCQQWYHAQCVGMSEEQLICDADFSCPRDLN

Nucleotide sequence

Length: 2,244

>KH2012:KH.C4.264.v2.A.SL1-1
GTTGCACCACATCAGCGCAGTTTAGGGTCTAAAAAAAAACTTATTTCCAAATTTATTAAG
ACAAATTTGGACACCAACAAAGATTTAGTTAAGTGCACGCTATTTCGAATGACTTTTCCT
GATGCTGGTGACCATCATGGCCATGAGATTGGAAAGGTTCAGTTGGGAACTGTAACAAAC
CTGAACCGGTTAGTTTTGAAATATCTCAAGGAAATAATCGCTAAAGGAAACTCATCAGTG
CCTGAGCTTAAGCAGCTTGTTGACAAGTATGTTGTTGAAGAACTCTTCAAAGATAGAACT
CCACCACCACCAACAAACAGAATATTTTATCCAACTAATCGTACTATTCGCAATCATTTG
TACACAGCTGGTATTAAAGCAACACCACAACCAAGGTGCAAACGAAAATCGAAACAAGCT
TTGTTACCCCTTGAATCGTCTAATACAGACAATTTTGATATACTTATTGATGCGACTGAA
GTCATACAAGATAAATCAGTTCAAACTAATAGGATGCTGGAACTTATAGACACCATTAAA
AAGGAGATGTACAATGTTACTTCAATAGATGCCTTGGTACAAGCAGAGGATCTTTTACAT
ACAGCTTTACAAGTTCTAAAAAACAGTTGCGTTGACCCAGTTGTAAGGGATGAGATGGTT
GTAAGTGATGAAATGGTTGCAACCAGCATACAGGGAAAGCGAAAGATGTTTCCAGTGTCA
AATAGTGAAGGACCACAGTCTAAGTTTCAAAAAATATATGAGGATATTTTGGTTGGTACA
TCTCAGCCACAAGTTTTTACATCAGACAGTGATCAGTTGACACTTCATACAAATCCTGGG
GTGAATATTGTGGTTAAAACACAAGATAAAATCAAATCAACACTACAAAAGAAAGGGAGT
TTAACCAAAATAGTGCCTTCAATAAATTTGATGGGTCTTAATGTAAATCAGCCACTTCTA
AAGATTGGACAAGATACACTCTCTTATGTACAACTTATGACTTTGGAAAAATCGGTAAAT
GCTGTAGATAGGAATTGCCTGCGTTCATTTGACGAAACTTTTCAAGATGGAAAGTTATGT
GACAATATCATTAACAGTTATTTGTGGCAGCTTACTTCAAGATATAATCATGTCATCCAT
GCTGATACCAGTGTTGGATACAGAATTCAACATGGTGAAGATGTGGGACAATTATGGGAA
AATGTTAAAAAAAATGAAAAGTCTTATGCATTTATTCCATGGAAATCAAATGGCCAGTAT
TGGGTTATGATAGCAATCAATATCAAGGAGCGCAAGCTGTTGTACTTGGATCCAAACCAA
ACAGATGATATTGATAAAACACAGTATATTTATGAGGCCAAAGAATTCATCAATCGTTCA
TTATCAGATATTTTAGGATTTTCTTTGACTTCAAGTGCCACCAACGTGCATAAGCCCAAC
AAAGGGAATATGTCTCCTGGTATATACGTGTGCATGTACGCATACTGGCTAACAAAAGGA
ATGAGCTTAGTACAACCCCACAAACCTGTATTGTTTCGGAAACATATTTTTGACACCATA
GTTGGAAATTGTACATTGGGTTTTCAGAACAAAGACAATTGCAAAGTGTGTCATAAAAAT
ATCAGGCATATAACTGGCAACAGTACATTGTGGGTAGAGTGCTCATCTTGTCAACAGTGG
TATCATGCACAATGTGTGGGAATGTCTGAAGAACAACTTATATGTGATGCTGATTTTTCA
TGTCCAAGAGATCTGAACTGATTATTGACATTATCCCAAACCATAATTTGGTGTTCAGTT
TAAACATATAAAATGTAATGGTTTAACATGTGGTCATATATTCACATATTTAAAATTTAC
TGTGACAAATATTATAAATTGAATTTGTTGTACCATAGTTTCTCCCATTATAAACAATAA
ATCTGTACTTAAAATAAAAAGTCTGTACTTAAAATAAATTTATTAGTTTCCAAACTGTAA
GACAGCATAGAAATACAAAAAACAATCAACAATTAATCGCTCACAAAATTTCATGTATAT
ATTTCTGGTAAAACGTAAGTGTGCACAAGGTGTATGAAAAAGGCCTTTAGTGTTATAACA
ACTGTCTTTTTTTCTTTATTGGTACAATAAATAGGGGTGATTTATCTAATATCTATTTAT
TTATAGGTATTGGGTATACCTTCATTAAATCAAAATTTATAATATGCAGAAATGTTATGT
CTTTTATTTATTTAAAATTTACAG

InterProScan

Pfam
CaRF (IPR029309) - T[10-122] 7.9E-19
Pfam
Peptidase_C48_C (IPR003653) - T[395-504] 4.2E-5
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[527-584] 9.8E-9
SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[529-582] 9.75E-8
SMART
Znf_PHD (IPR001965) - T[533-585] 2.7E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value