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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C10.43.v2....' > 
  3. Transcript 'Moocci.CG.ELv1_2.S63...' > 
  4. Transcript 'KH2012:KH.L77.4.v1.B...' > 
  5. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL13-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,267]

Sequences

Amino acid sequence

Length: 90

>KH.C4.420.v1.A.nonSL13-1
SVFVIYNFVSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGI
GKRKDGSVEKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 704

>KH2012:KH.C4.420.v1.A.nonSL13-1
GATCAGTGTTTGTGATCTACAACTTTGTATCCAGACTAATCGAAATGAGCAAGGCGCACC
CTCCTGAGCTTAAAAAGTTTATGGACAAGAAGTTGGATTTAAAATTAAATGGCGGACGAA
GCATTCAGGGAATTCTACGAGGATTTGATCCGTTCATGAACTTAGTTATTGACGATGGTA
TAGGCAAAAGAAAGGACGGTTCAGTTGAAAAGATCGGTATGGTTGTCGTGCGCGGAAACT
CTGTATTAATGATGGAGGCTGTGGACCGGATATAGTCGAATAATCAAAGGCTTATCCGTG
GTAAACAATCATTAAGAGTTCTGTTATTCAAACATAAGAATTCAATTAATATAGAAAGCG
ACATTATTATTCATCGTAGTGTCAACATTTTGGAACTTCTTTGTTATGTTCAATATACAT
TTTCTAATTTGATTTCAATTCACTACTCCCAATTAAATCATACATGTTTTTGTTGAATGT
GTCTCTGTTTTCTATGGTCACTTTATTATCATTGACAAATACAACTTTTATATTTGACCT
ACCTGTCTCGCTGTCTGAATGTTGTGTTTTGCCGTTGTGTCTTACATGTTAAGCTGGAAG
TAACAAATTTAACTCAAAATTGAAGAATGGCCAAAAGTAACTACAGATCTTAGGTTTTTT
TTTGAATGTCTTTTCGAGAAAATTAGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[19-88] 2.54368E-37
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[21-88] 1.1E-17
SMART
LSM_dom_euk/arc (IPR001163) - T[21-86] 3.9E-20
Pfam
LSM_dom_euk/arc (IPR001163) - T[22-85] 4.0E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.39E-36
RUXGL_HUMAN 67.105 % 112 2.18E-34