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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C4.584.v1....' > 
  2. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL20-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,243]

Sequences

Amino acid sequence

Length: 82

>KH.C4.420.v1.A.nonSL20-1
VSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDGSV
EKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 680

>KH2012:KH.C4.420.v1.A.nonSL20-1
TTGTATCCAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGAGCTTAAAAAGTTTATGG
ACAAGAAGTTGGATTTAAAATTAAATGGCGGACGAAGCATTCAGGGAATTCTACGAGGAT
TTGATCCGTTCATGAACTTAGTTATTGACGATGGTATAGGCAAAAGAAAGGACGGTTCAG
TTGAAAAGATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATTAATGATGGAGGCTGTGG
ACCGGATATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACAATCATTAAGAGTTCTGT
TATTCAAACATAAGAATTCAATTAATATAGAAAGCGACATTATTATTCATCGTAGTGTCA
ACATTTTGGAACTTCTTTGTTATGTTCAATATACATTTTCTAATTTGATTTCAATTCACT
ACTCCCAATTAAATCATACATGTTTTTGTTGAATGTGTCTCTGTTTTCTATGGTCACTTT
ATTATCATTGACAAATACAACTTTTATATTTGACCTACCTGTCTCGCTGTCTGAATGTTG
TGTTTTGCCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAATTTAACTCAAAATTGAA
GAATGGCCAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAATGTCTTTTCGAGAAAATT
AGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[11-80] 3.75436E-37
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[13-80] 7.98E-18
SMART
LSM_dom_euk/arc (IPR001163) - T[13-78] 3.9E-20
Pfam
LSM_dom_euk/arc (IPR001163) - T[14-77] 3.0E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.19E-36
RUXGL_HUMAN 67.105 % 112 1.7E-34