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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.845.v1....' > 
  2. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL25-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,256]

Sequences

Amino acid sequence

Length: 87

>KH.C4.420.v1.A.nonSL25-1
VIYNFVSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKR
KDGSVEKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 693

>KH2012:KH.C4.420.v1.A.nonSL25-1
GTGATCTACAACTTTGTATCCAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGAGCTT
AAAAAGTTTATGGACAAGAAGTTGGATTTAAAATTAAATGGCGGACGAAGCATTCAGGGA
ATTCTACGAGGATTTGATCCGTTCATGAACTTAGTTATTGACGATGGTATAGGCAAAAGA
AAGGACGGTTCAGTTGAAAAGATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATTAATG
ATGGAGGCTGTGGACCGGATATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACAATCA
TTAAGAGTTCTGTTATTCAAACATAAGAATTCAATTAATATAGAAAGCGACATTATTATT
CATCGTAGTGTCAACATTTTGGAACTTCTTTGTTATGTTCAATATACATTTTCTAATTTG
ATTTCAATTCACTACTCCCAATTAAATCATACATGTTTTTGTTGAATGTGTCTCTGTTTT
CTATGGTCACTTTATTATCATTGACAAATACAACTTTTATATTTGACCTACCTGTCTCGC
TGTCTGAATGTTGTGTTTTGCCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAATTTA
ACTCAAAATTGAAGAATGGCCAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAATGTCT
TTTCGAGAAAATTAGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[16-85] 3.94466E-37
SMART
LSM_dom_euk/arc (IPR001163) - T[18-83] 3.9E-20
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[18-85] 9.82E-18
Pfam
LSM_dom_euk/arc (IPR001163) - T[19-82] 3.6E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.58E-36
RUXGL_HUMAN 67.105 % 112 1.89E-34