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  1. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL26-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,237]

Sequences

Amino acid sequence

Length: 80

>KH.C4.420.v1.A.nonSL26-1
RLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDGSVEK
IGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 674

>KH2012:KH.C4.420.v1.A.nonSL26-1
CCAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGAGCTTAAAAAGTTTATGGACAAGA
AGTTGGATTTAAAATTAAATGGCGGACGAAGCATTCAGGGAATTCTACGAGGATTTGATC
CGTTCATGAACTTAGTTATTGACGATGGTATAGGCAAAAGAAAGGACGGTTCAGTTGAAA
AGATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATTAATGATGGAGGCTGTGGACCGGA
TATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACAATCATTAAGAGTTCTGTTATTCA
AACATAAGAATTCAATTAATATAGAAAGCGACATTATTATTCATCGTAGTGTCAACATTT
TGGAACTTCTTTGTTATGTTCAATATACATTTTCTAATTTGATTTCAATTCACTACTCCC
AATTAAATCATACATGTTTTTGTTGAATGTGTCTCTGTTTTCTATGGTCACTTTATTATC
ATTGACAAATACAACTTTTATATTTGACCTACCTGTCTCGCTGTCTGAATGTTGTGTTTT
GCCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAATTTAACTCAAAATTGAAGAATGG
CCAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAATGTCTTTTCGAGAAAATTAGTCAC
TTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[9-78] 3.69498E-37
SMART
LSM_dom_euk/arc (IPR001163) - T[11-76] 3.9E-20
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[11-78] 7.36E-18
Pfam
LSM_dom_euk/arc (IPR001163) - T[12-75] 2.7E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.23E-36
RUXGL_HUMAN 67.105 % 112 1.7E-34





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