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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.309.v4....' > 
  2. Transcript 'KH2012:KH.C11.339.v1...' > 
  3. Transcript 'KH2012:KH.L24.2.v1.B...' > 
  4. Transcript 'KH2012:KH.C6.283.v1....' > 
  5. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL33-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,270]

Sequences

Amino acid sequence

Length: 91

>KH.C4.420.v1.A.nonSL33-1
RSVFVIYNFVSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDG
IGKRKDGSVEKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 707

>KH2012:KH.C4.420.v1.A.nonSL33-1
GTCGATCAGTGTTTGTGATCTACAACTTTGTATCCAGACTAATCGAAATGAGCAAGGCGC
ACCCTCCTGAGCTTAAAAAGTTTATGGACAAGAAGTTGGATTTAAAATTAAATGGCGGAC
GAAGCATTCAGGGAATTCTACGAGGATTTGATCCGTTCATGAACTTAGTTATTGACGATG
GTATAGGCAAAAGAAAGGACGGTTCAGTTGAAAAGATCGGTATGGTTGTCGTGCGCGGAA
ACTCTGTATTAATGATGGAGGCTGTGGACCGGATATAGTCGAATAATCAAAGGCTTATCC
GTGGTAAACAATCATTAAGAGTTCTGTTATTCAAACATAAGAATTCAATTAATATAGAAA
GCGACATTATTATTCATCGTAGTGTCAACATTTTGGAACTTCTTTGTTATGTTCAATATA
CATTTTCTAATTTGATTTCAATTCACTACTCCCAATTAAATCATACATGTTTTTGTTGAA
TGTGTCTCTGTTTTCTATGGTCACTTTATTATCATTGACAAATACAACTTTTATATTTGA
CCTACCTGTCTCGCTGTCTGAATGTTGTGTTTTGCCGTTGTGTCTTACATGTTAAGCTGG
AAGTAACAAATTTAACTCAAAATTGAAGAATGGCCAAAAGTAACTACAGATCTTAGGTTT
TTTTTTGAATGTCTTTTCGAGAAAATTAGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[20-89] 2.61902E-37
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[22-89] 1.15E-17
SMART
LSM_dom_euk/arc (IPR001163) - T[22-87] 3.9E-20
Pfam
LSM_dom_euk/arc (IPR001163) - T[23-86] 4.2E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.66E-36
RUXGL_HUMAN 67.105 % 112 2.34E-34