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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L4.55.v1.A...'
  2. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL5-1

Possible name(s)

LSM7; LSM8; SNRPG

Location

KhC4 [1,755,563 / 1,756,249]

Sequences

Amino acid sequence

Length: 84

>KH.C4.420.v1.A.nonSL5-1
NFVSRLIEMSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDG
SVEKIGMVVVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 686

>KH2012:KH.C4.420.v1.A.nonSL5-1
ACAACTTTGTATCCAGACTAATCGAAATGAGCAAGGCGCACCCTCCTGAGCTTAAAAAGT
TTATGGACAAGAAGTTGGATTTAAAATTAAATGGCGGACGAAGCATTCAGGGAATTCTAC
GAGGATTTGATCCGTTCATGAACTTAGTTATTGACGATGGTATAGGCAAAAGAAAGGACG
GTTCAGTTGAAAAGATCGGTATGGTTGTCGTGCGCGGAAACTCTGTATTAATGATGGAGG
CTGTGGACCGGATATAGTCGAATAATCAAAGGCTTATCCGTGGTAAACAATCATTAAGAG
TTCTGTTATTCAAACATAAGAATTCAATTAATATAGAAAGCGACATTATTATTCATCGTA
GTGTCAACATTTTGGAACTTCTTTGTTATGTTCAATATACATTTTCTAATTTGATTTCAA
TTCACTACTCCCAATTAAATCATACATGTTTTTGTTGAATGTGTCTCTGTTTTCTATGGT
CACTTTATTATCATTGACAAATACAACTTTTATATTTGACCTACCTGTCTCGCTGTCTGA
ATGTTGTGTTTTGCCGTTGTGTCTTACATGTTAAGCTGGAAGTAACAAATTTAACTCAAA
ATTGAAGAATGGCCAAAAGTAACTACAGATCTTAGGTTTTTTTTTGAATGTCTTTTCGAG
AAAATTAGTCACTTTAATTTAATTAG

InterProScan

CDD
Sm_G (IPR034098) - T[13-82] 3.34288E-37
SMART
LSM_dom_euk/arc (IPR001163) - T[15-80] 3.9E-20
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[15-82] 8.8E-18
Pfam
LSM_dom_euk/arc (IPR001163) - T[16-79] 3.2E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 1.67E-36
RUXGL_HUMAN 67.105 % 112 2.33E-34