Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C4.420.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.420.v1.A.nonSL8-1

Possible name(s)

LSM7; LSM8; SNRPG

Gene model

KH2012:KH.C4.420

Location

KhC4 [1,755,563 / 1,756,225]

Sequences

Amino acid sequence

Length: 76

>KH.C4.420.v1.A.nonSL8-1
MSKAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDGSVEKIGMV
VVRGNSVLMMEAVDRI

Nucleotide sequence

Length: 662

>KH2012:KH.C4.420.v1.A.nonSL8-1
AAATGAGCAAGGCGCACCCTCCTGAGCTTAAAAAGTTTATGGACAAGAAGTTGGATTTAA
AATTAAATGGCGGACGAAGCATTCAGGGAATTCTACGAGGATTTGATCCGTTCATGAACT
TAGTTATTGACGATGGTATAGGCAAAAGAAAGGACGGTTCAGTTGAAAAGATCGGTATGG
TTGTCGTGCGCGGAAACTCTGTATTAATGATGGAGGCTGTGGACCGGATATAGTCGAATA
ATCAAAGGCTTATCCGTGGTAAACAATCATTAAGAGTTCTGTTATTCAAACATAAGAATT
CAATTAATATAGAAAGCGACATTATTATTCATCGTAGTGTCAACATTTTGGAACTTCTTT
GTTATGTTCAATATACATTTTCTAATTTGATTTCAATTCACTACTCCCAATTAAATCATA
CATGTTTTTGTTGAATGTGTCTCTGTTTTCTATGGTCACTTTATTATCATTGACAAATAC
AACTTTTATATTTGACCTACCTGTCTCGCTGTCTGAATGTTGTGTTTTGCCGTTGTGTCT
TACATGTTAAGCTGGAAGTAACAAATTTAACTCAAAATTGAAGAATGGCCAAAAGTAACT
ACAGATCTTAGGTTTTTTTTTGAATGTCTTTTCGAGAAAATTAGTCACTTTAATTTAATT
AG

InterProScan

CDD
Sm_G (IPR034098) - T[5-74] 2.9668E-37
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[7-74] 6.14E-18
SMART
LSM_dom_euk/arc (IPR001163) - T[7-72] 3.9E-20
Pfam
LSM_dom_euk/arc (IPR001163) - T[8-71] 2.3E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUXG_HUMAN 71.053 % 117 9.65E-37
RUXGL_HUMAN 67.105 % 112 1.42E-34