- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C5.428.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.428.v1.A.ND1-1
Possible name(s)
CCNA1; CCNJ; CCNJL
Gene model
Location
KhC5 [2,459,427 / 2,461,689]
Amino acid sequence
Length: 314
>KH.C5.428.v1.A.ND1-1
MDLDWPGCKNDLAKDIHDTLKARENFMLRLTGSSKLMYWRRYLVDWLALTCQKYRLNSNA
QHLAVCLYDRFTDQFQLGVEDLQMLVLCCLLVASKFEEREEKIPKFKILMDHLQWNLNAA
EYMTMEIRLLSAFEWDIGFPTASHFKEYYMQVALGTRDLHAGQPLTNREQVYMYLEKNVS
YFLEVSLQDQAFLVFKPSLITASCVAASRICLHIAPTWTVELHKVTNFAWHHLVPCIEIL
LRLHDEDRRAMHSNGSSSHVSGTLSIAHQQVLNSTGSTPVTSPVPPLPFTSDNQRNQHMP
TTIPTGRYNRGYLV
Nucleotide sequence
Length: 2,057
>KH2012:KH.C5.428.v1.A.ND1-1
TGAGATTGCCACCCAACAAGTTGCACTAGGCAGGTTTGTGTGGGGGATGAGTTAAGTATT
GCAGTTCCTCATATTGTGCAATGTACAGCATAACTGGTAACCAGAAGATATTGGATTCAA
AGCTGTGTGCTAATGGTCAACAAGATAATTGCAATGTTCTACTAGTCTATCCTTAAACAT
TTACCAACACAGGACTCTTTTAAACAAAGCATCTCCCAGGGACCTTCGTTCGTTTCCTGG
GTTTGATTTATTACATCCCGTGAAGTTCTGACAACTGCCGTGATCGCTTTGATTTCAAAT
GCTTCCTACACGTGTTGCGATATTCTGTGGCATTCATAGCTATAGCTACAACGGCTGATC
AGATACGTTCCTTAACGAGCTAAACGGGTTTCATGTTAAACGCTCGCTTGTCAAGCAGTT
TACTTGCGCTTAAAAAATGCGAATTAGAAATTGACGTTGTGTCAAAAACATGATAATTGA
TGATTCTTCAGCCTTCACTAGCACCGATTCTTTAAAGTGAACAATAAAAATCTCACAGAT
TTTTCAGAATGTCAAACTAAACAGTGCTGGTTAGTTTGTATTGCGGTAAACTGTGTAAGG
CCAGTTTAGTTCCTACCTAGAAAAAATCTAAATTAAATGGATTTGGACTGGCCAGGATGT
AAGAATGACTTGGCCAAGGACATCCATGACACACTAAAGGCTAGGGAAAACTTTATGCTG
CGTCTTACCGGCAGCTCAAAGTTGATGTACTGGCGCAGGTACTTGGTCGATTGGCTTGCA
CTTACATGCCAGAAGTATAGACTCAACAGCAATGCTCAGCATCTTGCTGTGTGTCTCTAT
GATCGGTTTACAGACCAATTCCAGCTTGGTGTTGAAGACTTGCAAATGCTTGTGCTTTGC
TGTCTACTAGTGGCAAGCAAGTTTGAGGAGCGAGAGGAAAAAATCCCAAAGTTCAAGATT
CTCATGGACCATCTCCAGTGGAATCTTAATGCTGCAGAGTACATGACCATGGAAATCCGT
TTACTCAGTGCATTTGAGTGGGACATTGGGTTTCCAACTGCTTCCCACTTCAAAGAGTAC
TACATGCAAGTGGCTCTTGGGACACGCGATTTACATGCTGGTCAACCTCTTACGAACCGA
GAGCAAGTGTATATGTACCTGGAAAAGAACGTTAGCTACTTTTTAGAAGTCTCGCTCCAA
GACCAAGCCTTTCTGGTGTTTAAGCCTTCTCTCATTACTGCCTCATGTGTTGCTGCTTCC
CGAATTTGTCTTCACATAGCTCCCACATGGACTGTGGAACTGCATAAAGTCACCAACTTC
GCCTGGCATCACCTGGTACCTTGTATTGAGATTCTGTTACGCTTACACGATGAAGACAGA
CGTGCAATGCATAGTAATGGATCTTCTTCCCATGTGTCCGGCACCCTCAGCATTGCGCAT
CAACAGGTACTAAACAGCACCGGCAGTACACCAGTAACATCCCCCGTACCTCCACTACCA
TTTACATCCGATAATCAGCGCAACCAGCATATGCCAACTACCATTCCAACTGGAAGATAC
AACCGTGGCTACCTGGTTTGATTCCAACTCAGATTAGAAAATTTTTCTTTTGTATAATGC
GTGTTCTGCTTTCCTTTTCGTGCAGTCTATTGCTCTTCACTTTTCTTTTCAAATTGTATA
TTGTTTATCAGTGCCACCTCTTATAAAACAGCCAACTGTGCCATAAGTTACCATCTTGCC
AAGAATATCAAGCAAAAAATCAAAACAAAATCTATGTCAAATGTATTTTGAAAATGCATC
TCAATATTCACTGTGATACCTTCAGGTTCTCTTACTGTTAAACTCATCCCGAATTAACGT
ACGTGCTGCTCTGCCTTCTGTGTGTTAGTCTCTTAGTTCAGCATTGCATTTGTTTTGCAC
ATTTTACAAACCTGCATATGTTTCTATTGCAATTGTTTTACATTCATTTCTCATACTACC
GACATTGTAGTGCTTGCTTTTGTTATACCTTGCTTGAGTTCAAGCTGTACTGTCACTCAC
ATTCTTTGTATTCATAC
| PANTHER |
Cyclin-J (IPR028859) - T[2-257] 8.5E-68 |
| SUPERFAMILY |
Cyclin-like_sf (IPR036915) - T[6-137] 2.2E-24 - T[142-248] 1.13E-17 |
| Pfam |
Cyclin_N (IPR006671) - T[38-137] 3.4E-17 |
| CDD |
Cyclin-like (IPR013763) - T[40-130] 8.22288E-8 |
| SMART |
Cyclin-like (IPR013763) - T[45-131] 9.8E-6 - T[163-242] 2.6 |
| Pfam |
Cyclin_C-dom (IPR004367) - T[140-249] 7.3E-16 |
| SMART |
Cyclin_C-dom (IPR004367) - T[140-272] 1.6E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CCNJ_HUMAN | 38.235 % | 182 | 4.84E-55 |
| CCNJL_HUMAN | 30.537 % | 138 | 1.61E-37 |