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  1. Clone 'cien85233' > 
  2. Transcript 'KH2012:KH.C8.97.v2.A...' > 
  3. Transcript 'KH2012:KH.C6.190.v1....'

Transcript Model

Transcript Id

KH2012:KH.C6.190.v1.A.SL1-1

Possible name(s)

SDE2; SF3A3

Gene model

KH2012:KH.C6.190

Location

KhC6 [1,695,345 / 1,701,563]

Sequences

Amino acid sequence

Length: 501

>KH.C6.190.v1.A.SL1-1
LRMETILEQQRSLHEEKERLLDAMRKETLHEKTTLRENINSDYRVKMLLDRSMEVSATLT
DLYEDKDGLRKEEIQALAGPHEFQEFYKRLKVIKEFHRKHPNEIFVPMSAEFNALDESRE
KPTDEVNNLVEFSDEEAYGRFLDLHECYMKYINLKGVDRVSYVRYLDIFDKLFEINRDKK
NRQYKEYLQSLLQYLLSFHRRVKSLVDLTVEFKEVEANFEIQWSRMEFPGWGKEAGSAMT
YTGAHLDLSPFSSSEELSSLGLDRLKSALMALNLKCGGTLEQRADRLFSTKGKNIHELNP
ALFSKAKNAKKEDKNRGKETAFIEAKIYHMMEQLGEQRQATRDNVQRRQARTETERQDDG
EEVVSESESEEEDDEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYTCEICGNQTYRGPK
AFQRHFSEWRHAHGMRCLGIPNTAHFANVTQIEDAMALWTKIKQAKSSERWNPENEEEYE
DSAGNVVTKKTYEDLQRQGLL

Nucleotide sequence

Length: 2,167

>KH2012:KH.C6.190.v1.A.SL1-1
CCTTTAACGAAAAATAGATTGCGTATGAACGTTTTGGCTTGATAATTTAGAGTTACACTG
TTTTGTGGTGTTGTTAATATTGCTAGTTAAGAATGGAAACGATTTTAGAACAGCAGAGAA
GTCTTCATGAAGAGAAGGAACGTCTTCTTGATGCCATGAGAAAAGAAACACTCCATGAAA
AAACTACACTGAGAGAAAATATCAATTCAGACTACAGAGTAAAGATGCTTCTGGATAGAA
GCATGGAAGTATCCGCCACATTAACTGATTTGTACGAGGATAAAGATGGTCTCAGGAAAG
AAGAAATACAAGCACTTGCTGGACCTCATGAGTTTCAAGAGTTTTATAAACGTCTCAAGG
TCATCAAAGAATTCCATAGAAAACATCCAAATGAAATATTTGTTCCAATGTCTGCGGAGT
TTAACGCCTTGGATGAATCAAGAGAAAAACCAACTGATGAAGTGAACAATTTGGTTGAGT
TTTCTGATGAAGAAGCTTATGGGAGGTTTCTTGACCTTCACGAATGTTACATGAAGTATA
TTAACCTCAAAGGTGTGGACCGAGTCAGCTATGTTCGATATCTTGACATTTTTGACAAAC
TTTTCGAAATAAACAGAGACAAGAAGAATCGGCAATACAAAGAGTATCTCCAATCCCTTC
TTCAATATCTCCTATCATTTCATCGAAGAGTTAAATCCCTTGTTGATCTCACAGTAGAAT
TCAAGGAGGTCGAAGCTAACTTCGAAATCCAGTGGTCTCGGATGGAATTCCCGGGATGGG
GTAAAGAAGCTGGGAGCGCGATGACATACACGGGAGCCCATTTGGATCTAAGTCCTTTCT
CTTCTTCTGAGGAGTTATCCTCTCTTGGTCTTGACCGTCTTAAATCAGCTTTAATGGCGT
TGAATTTGAAATGTGGGGGAACATTAGAACAAAGGGCGGACAGACTTTTCTCAACTAAAG
GAAAAAATATTCATGAGTTAAACCCAGCTCTTTTCTCGAAAGCCAAAAACGCGAAAAAAG
AGGACAAAAATCGAGGCAAAGAGACAGCGTTTATCGAGGCAAAGATCTACCACATGATGG
AGCAGTTGGGTGAGCAGCGACAAGCCACGCGTGACAACGTACAACGACGACAAGCGAGGA
CAGAAACGGAGCGACAAGATGATGGAGAGGAAGTAGTGTCTGAAAGTGAAAGTGAAGAAG
AAGACGACGAGATTATTTATAATCCTAAGAATCTCCCACTAGGTTGGGATGGTAAACCAA
TCCCTTACTGGTTGTACAAGTTGCATGGGTTGAATATCAACTATACATGCGAGATATGCG
GGAACCAAACCTACAGGGGGCCGAAAGCTTTCCAAAGACATTTCTCGGAGTGGAGACACG
CCCATGGTATGAGGTGCTTAGGAATTCCCAACACAGCGCATTTTGCTAATGTTACTCAGA
TAGAAGACGCTATGGCTCTGTGGACAAAAATCAAGCAAGCAAAAAGTTCGGAGCGTTGGA
ATCCTGAGAATGAAGAAGAATATGAAGATAGTGCTGGGAATGTGGTCACTAAGAAGACGT
ACGAGGACTTACAAAGACAAGGATTGCTTTAAGCCTGTCTGTCTCAATTTTTTAGATGTC
AAATCATAAAATTTTTTTTTTACCAAAAATCAGGATTTTGTAAGAAAGACTGAAAACTGC
TCTGTATTTTCTGCAGTAAAAACATGCATTTGGTTATTTTTGGTTAGGGCAATTCTTTGA
ATAAAGCTAAGTGTAATACTCCTTAAATGTAAAAGCAATTATTACACTTAAATCCACACA
AATTCGTTCAAAAAATGTCCAGACTTTGCAGTCATAGTAAAACAATCCTGCTGCTAATAT
GTGTGTAGCTATTAGCCTAATAAAGTTTTGTACATTATATATTGATATCATTTTAAAATT
TCAATCCTTATTGAGCGAAAAATTGTTAAACCATTAACAATTTTCAGGTTTTGTGGCACA
ATAGCTTGCTTATTACATACTCGTTTCTAGCCAAGCAGGTACGGGTTCAAGGCCTACCAT
TGTGAGTTTATAGTCACTTACCAGCACTAAAAGCAGTCTAAATTGTCACCCAACCATTAT
AGCTTACTTGAGAAACAGGTAATAATATATTGTTTCAATTTTATTTCATGAATAGTTGTG
CATTTAT

InterProScan

PANTHER
SF3A3 (IPR031776) - T[3-501] 1.1E-184
Pfam
SF3a60_bindingd (IPR021966) - T[77-102] 2.8E-13
Pfam
SF3A3_dom (IPR031774) - T[131-208] 4.4E-24
Pfam
DUF3449 (IPR024598) - T[324-500] 5.1E-77
ProSiteProfiles
Matrin/U1-C_Znf_C2H2 (IPR000690) - T[406-437] 9.048

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3A3_HUMAN 67.864 % 683 0





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