Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.L153.21.v2...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.C6.190.v1....'

Transcript Model

Transcript Id

KH2012:KH.C6.190.v1.A.SL2-1

Possible name(s)

SDE2; SF3A3

Gene model

KH2012:KH.C6.190

Location

KhC6 [1,695,345 / 1,701,546]

Sequences

Amino acid sequence

Length: 501

>KH.C6.190.v1.A.SL2-1
LRMETILEQQRSLHEEKERLLDAMRKETLHEKTTLRENINSDYRVKMLLDRSMEVSATLT
DLYEDKDGLRKEEIQALAGPHEFQEFYKRLKVIKEFHRKHPNEIFVPMSAEFNALDESRE
KPTDEVNNLVEFSDEEAYGRFLDLHECYMKYINLKGVDRVSYVRYLDIFDKLFEINRDKK
NRQYKEYLQSLLQYLLSFHRRVKSLVDLTVEFKEVEANFEIQWSRMEFPGWGKEAGSAMT
YTGAHLDLSPFSSSEELSSLGLDRLKSALMALNLKCGGTLEQRADRLFSTKGKNIHELNP
ALFSKAKNAKKEDKNRGKETAFIEAKIYHMMEQLGEQRQATRDNVQRRQARTETERQDDG
EEVVSESESEEEDDEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYTCEICGNQTYRGPK
AFQRHFSEWRHAHGMRCLGIPNTAHFANVTQIEDAMALWTKIKQAKSSERWNPENEEEYE
DSAGNVVTKKTYEDLQRQGLL

Nucleotide sequence

Length: 2,150

>KH2012:KH.C6.190.v1.A.SL2-1
ATTGCGTATGAACGTTTTGGCTTGATAATTTAGAGTTACACTGTTTTGTGGTGTTGTTAA
TATTGCTAGTTAAGAATGGAAACGATTTTAGAACAGCAGAGAAGTCTTCATGAAGAGAAG
GAACGTCTTCTTGATGCCATGAGAAAAGAAACACTCCATGAAAAAACTACACTGAGAGAA
AATATCAATTCAGACTACAGAGTAAAGATGCTTCTGGATAGAAGCATGGAAGTATCCGCC
ACATTAACTGATTTGTACGAGGATAAAGATGGTCTCAGGAAAGAAGAAATACAAGCACTT
GCTGGACCTCATGAGTTTCAAGAGTTTTATAAACGTCTCAAGGTCATCAAAGAATTCCAT
AGAAAACATCCAAATGAAATATTTGTTCCAATGTCTGCGGAGTTTAACGCCTTGGATGAA
TCAAGAGAAAAACCAACTGATGAAGTGAACAATTTGGTTGAGTTTTCTGATGAAGAAGCT
TATGGGAGGTTTCTTGACCTTCACGAATGTTACATGAAGTATATTAACCTCAAAGGTGTG
GACCGAGTCAGCTATGTTCGATATCTTGACATTTTTGACAAACTTTTCGAAATAAACAGA
GACAAGAAGAATCGGCAATACAAAGAGTATCTCCAATCCCTTCTTCAATATCTCCTATCA
TTTCATCGAAGAGTTAAATCCCTTGTTGATCTCACAGTAGAATTCAAGGAGGTCGAAGCT
AACTTCGAAATCCAGTGGTCTCGGATGGAATTCCCGGGATGGGGTAAAGAAGCTGGGAGC
GCGATGACATACACGGGAGCCCATTTGGATCTAAGTCCTTTCTCTTCTTCTGAGGAGTTA
TCCTCTCTTGGTCTTGACCGTCTTAAATCAGCTTTAATGGCGTTGAATTTGAAATGTGGG
GGAACATTAGAACAAAGGGCGGACAGACTTTTCTCAACTAAAGGAAAAAATATTCATGAG
TTAAACCCAGCTCTTTTCTCGAAAGCCAAAAACGCGAAAAAAGAGGACAAAAATCGAGGC
AAAGAGACAGCGTTTATCGAGGCAAAGATCTACCACATGATGGAGCAGTTGGGTGAGCAG
CGACAAGCCACGCGTGACAACGTACAACGACGACAAGCGAGGACAGAAACGGAGCGACAA
GATGATGGAGAGGAAGTAGTGTCTGAAAGTGAAAGTGAAGAAGAAGACGACGAGATTATT
TATAATCCTAAGAATCTCCCACTAGGTTGGGATGGTAAACCAATCCCTTACTGGTTGTAC
AAGTTGCATGGGTTGAATATCAACTATACATGCGAGATATGCGGGAACCAAACCTACAGG
GGGCCGAAAGCTTTCCAAAGACATTTCTCGGAGTGGAGACACGCCCATGGTATGAGGTGC
TTAGGAATTCCCAACACAGCGCATTTTGCTAATGTTACTCAGATAGAAGACGCTATGGCT
CTGTGGACAAAAATCAAGCAAGCAAAAAGTTCGGAGCGTTGGAATCCTGAGAATGAAGAA
GAATATGAAGATAGTGCTGGGAATGTGGTCACTAAGAAGACGTACGAGGACTTACAAAGA
CAAGGATTGCTTTAAGCCTGTCTGTCTCAATTTTTTAGATGTCAAATCATAAAATTTTTT
TTTTACCAAAAATCAGGATTTTGTAAGAAAGACTGAAAACTGCTCTGTATTTTCTGCAGT
AAAAACATGCATTTGGTTATTTTTGGTTAGGGCAATTCTTTGAATAAAGCTAAGTGTAAT
ACTCCTTAAATGTAAAAGCAATTATTACACTTAAATCCACACAAATTCGTTCAAAAAATG
TCCAGACTTTGCAGTCATAGTAAAACAATCCTGCTGCTAATATGTGTGTAGCTATTAGCC
TAATAAAGTTTTGTACATTATATATTGATATCATTTTAAAATTTCAATCCTTATTGAGCG
AAAAATTGTTAAACCATTAACAATTTTCAGGTTTTGTGGCACAATAGCTTGCTTATTACA
TACTCGTTTCTAGCCAAGCAGGTACGGGTTCAAGGCCTACCATTGTGAGTTTATAGTCAC
TTACCAGCACTAAAAGCAGTCTAAATTGTCACCCAACCATTATAGCTTACTTGAGAAACA
GGTAATAATATATTGTTTCAATTTTATTTCATGAATAGTTGTGCATTTAT

InterProScan

PANTHER
SF3A3 (IPR031776) - T[3-501] 1.1E-184
Pfam
SF3a60_bindingd (IPR021966) - T[77-102] 2.8E-13
Pfam
SF3A3_dom (IPR031774) - T[131-208] 4.4E-24
Pfam
DUF3449 (IPR024598) - T[324-500] 5.1E-77
ProSiteProfiles
Matrin/U1-C_Znf_C2H2 (IPR000690) - T[406-437] 9.048

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3A3_HUMAN 67.864 % 683 0