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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Cisavi.CG.ENS81.R16....' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  5. Transcript 'KH2012:KH.C6.210.v2....'

Transcript Model

Transcript Id

KH2012:KH.C6.210.v2.A.SL2-1

Possible name(s)

SNIP1

Gene model

KH2012:KH.C6.210

Location

KhC6 [1,901,728 / 1,903,354]

Sequences

Amino acid sequence

Length: 117

>KH.C6.210.v2.A.SL2-1
ILHLHRQSAYLLGRLRRIADIPIDHPSCSKQHAVFQFRLVDVEVDGVMKRRVKPYIIDLG
SANGTYVNNERIEAQRYVELKEQDLLKFGFSSREYILLHDKADTSELGSEEEEEEGE

Nucleotide sequence

Length: 830

>KH2012:KH.C6.210.v2.A.SL2-1
ATACTCCATCTCCATAGACAGAGTGCTTATTTATTAGGTAGGTTAAGAAGAATTGCCGAT
ATTCCGATAGATCATCCATCGTGCTCCAAACAACATGCTGTGTTTCAATTCCGACTTGTA
GATGTAGAAGTAGATGGGGTTATGAAACGAAGAGTGAAACCGTACATAATAGACCTTGGA
TCAGCTAATGGAACATATGTAAACAATGAGAGGATTGAAGCACAAAGATATGTTGAACTA
AAAGAACAAGATCTTCTAAAGTTTGGTTTTAGTTCAAGAGAATATATCTTGCTTCATGAT
AAAGCTGATACAAGTGAACTTGGAAGTGAGGAAGAAGAAGAAGAAGGGGAATGAAGAGAG
AGGTAAAAGAAAAAGGCAAAACAAGAGAAGCTCCAAACTGATAAAGGCAAAATGAGAGAG
CTCCGAATGCAAAAAAGGGAAATAATGGGCTAGAATGAACGCCACCTTATTGCTAACTGT
TAAAGAGCTCTAGAGAAAAACTGGGATTTCTGATTTTATGCACAATGTTTTGAGAATCTG
ACTATAGTGTTTCCTTTATAGTTTTATTACTTGCATTTGGGGTTACATTTTACAATCAAA
GTAATAATGTTTAACACTGGCCGAACGTTTTACCTTTGTAAAGTGATATTGGTTAACATC
ACGTCTTCTTGCAAACATTGGTCAAAAATGATCATTTTCTCACTTCAATGTATTGTGATA
TACCCTGGAATTTTTATGTGATTTGCCATTTTTAATGTCTGAGCTATTGTTGCTAGACCG
TTTCCAATATTTTGGTACATTACTGCCTTAATAATCATTCGAATTTTTAG

InterProScan

CDD
FHA_dom (IPR000253) - T[1-89] 1.61774E-21
SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[4-101] 3.63E-22
SMART
FHA_dom (IPR000253) - T[9-72] 2.2E-13
ProSiteProfiles
FHA_dom (IPR000253) - T[10-72] 11.544
Pfam
FHA_dom (IPR000253) - T[10-89] 4.1E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 75 % 181 5.05E-57