- Transcript 'KH2012:KH.L20.16.v1....' >
- Transcript 'KH2012:KH.C7.219.v1....' >
- Transcript 'KH2012:KH.C1.147.v1....' >
- Transcript 'KH2012:KH.C6.253.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.253.v1.R.ND1-1
Possible name(s)
ZNF112; ZNF235; ZNF454
Gene model
Location
KhC6 [2,020,410 / 2,022,128]
Amino acid sequence
Length: 249
>KH.C6.253.v1.R.ND1-1
TTVIKYIHGSYLEMGARKLKKDIKRRDTSCLVCNKNFKRYSYLVFHLKTHTEFKCDVCHK
IYPSLKKLKNHNRVHIDKKPFLCPICQKTFRCNSVFKLHERVHTGERPYTCNICDKSFKL
KNHLRIHIPIHFDEKKFECETCGKFFQRNCNLKKHVMIHSELKPFKCVICDKGFKQKYNW
LVHKRVHTGEKPFKCEVCERPFSLHGAMVTHLKLHYRDRSHICELCKKAFARRSHLKSHK
CVKKPKLEV
Nucleotide sequence
Length: 1,718
>KH2012:KH.C6.253.v1.R.ND1-1
AGGTTTTGGTAAGACACTCATAGTAGGTGCTCGTTTGTATTTGAAACTGTAAACTAAAAC
TGATATTACCTTTCAAGAATTGCTGCTTTCGTCTGCTTTCCATAAAGTCCAGGAGAAACA
ACAATTGGAGTACAAATGTGAGTTTGAACAACTGTCATCAAATACATTCATGGAAGTTAT
TTGGAAATGGGTGCAAGAAAGTTAAAAAAAGACATTAAAAGGAGGGACACAAGCTGTCTC
GTCTGTAACAAGAACTTTAAACGTTATTCTTATCTTGTTTTTCATCTGAAGACACACACT
GAATTCAAATGTGATGTTTGTCACAAAATTTATCCGTCTTTAAAAAAATTGAAAAACCAC
AACAGAGTCCATATTGATAAGAAGCCGTTTTTGTGCCCGATTTGTCAAAAAACATTTCGT
TGTAATTCAGTTTTTAAACTGCATGAAAGAGTTCATACTGGTGAAAGACCTTACACATGT
AACATATGTGACAAGTCATTCAAACTGAAGAACCATCTAAGGATACACATACCTATTCAC
TTTGATGAAAAAAAATTCGAATGCGAAACATGTGGGAAGTTTTTTCAACGTAACTGTAAT
TTAAAAAAACACGTTATGATCCACAGTGAATTAAAGCCCTTTAAATGTGTTATATGTGAT
AAAGGATTTAAACAAAAATATAATTGGTTAGTACATAAGCGAGTTCACACTGGAGAAAAA
CCTTTTAAATGTGAAGTCTGTGAAAGGCCGTTTTCATTACATGGTGCCATGGTAACTCAT
CTCAAACTACACTATAGAGATAGATCTCATATTTGTGAATTGTGCAAAAAAGCTTTTGCA
AGACGAAGCCACCTTAAGAGTCATAAATGTGTTAAGAAACCTAAGTTGGAAGTGTGAGTC
ACAAACTAGAAGTGTGACTTAAGCTAAAAGATTTCTAACTTTTATGCTTTCCAAGCCCGA
GTGTCACTATTCTCATTCTATTTTTTGAGGTAAGGTCCTTGTCAAGGACGAAGGACCTTT
TTATTAAGACCAGGTTTGGCCCATTACCCCAACACCCAAAAGCCCATTTAAGTCTTTCAC
TTTATTATTCCTAACTTACTTTGTCATTCCTAAACTGATTCTGATGCCAAAAAGAATGCT
AAAATTCATAAATGTGTTTGTGATCTTAGTGTTTTTGGGTTCTATTCTGTTATGATTTAT
AAGTGTTATGACTGCAAGCTAAAATTGTGATTGCCTTAATTGTACTGTTATGATTTTAAG
CTATTAACAACTTAAATTGCAACACTGTGTAGTAAATTCGTCTGGTGCAATGTGCAACTT
GTAAAGGCACAAGGTGTGTGGAACAGAACACCTATGTTATAACTACCCTTAATTAATGTG
GTGAATGAAATATACTTTGGCTCTGCCTGTTTAGTATAGACACCTAACAGCAAGGTAAAA
TCTGGGGTGACATTGTTAAAATGCAGTTACACTCATAGTTGTCAAACATAGGGAACCTCA
TTGATTAATGTGGTGAATGAAATATACTTTGGTTCTGCTTGTTTTGTATAGACACCTTAC
AGCAGAGTGAACCCATTCAAAGTGTGAATCTGTGGTTCTACATATTATGTCGCTAGTCAC
CTCTGTTTCTAACATTCTATATAACTTCACACCTACTATCACTGTATGTTTACATTTGAC
GGTTGTTTTAATTAACAATAGAATTATTTGTTTTGCAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[27-61] 5.18E-5 - T[53-103] 1.76E-12 - T[89-146] 4.04E-19 - T[146-202] 2.71E-18 - T[187-239] 5.18E-14 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[28-55] 10.429 - T[53-80] 12.279 - T[81-108] 14.815 - T[109-136] 12.715 - T[137-164] 14.295 - T[165-192] 14.773 - T[193-220] 11.136 - T[221-240] 8.995 |
| SMART |
Znf_C2H2_type (IPR013087) - T[28-50] 0.91 - T[53-75] 0.01 - T[81-103] 0.17 - T[109-131] 0.0051 - T[137-159] 0.023 - T[165-187] 0.016 - T[193-215] 0.026 - T[221-241] 95.0 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[30-50] . - T[55-75] . - T[83-103] . - T[111-131] . - T[139-159] . - T[167-187] . - T[195-215] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN112_HUMAN | 42.13 % | 187 | 2.44E-54 |
| ZN235_HUMAN | 41.667 % | 182 | 2.75E-53 |
| ZN454_HUMAN | 39.252 % | 180 | 1.41E-53 |