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TRANSCRIPT CARD

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  1. Region 'REG00001389' > 
  2. Transcript 'KH2012:KH.C6.272.v1....'

Transcript Model

Transcript Id

KH2012:KH.C6.272.v1.A.SL2-1

Possible name(s)

KHDC4

Gene model

KH2012:KH.C6.272

Location

KhC6 [2,343,957 / 2,346,040]

Sequences

Amino acid sequence

Length: 555

>KH.C6.272.v1.A.SL2-1
TMSKDSWRQNSMPPRPDYGNFKAPSLPSANSNPAPKKTRISKFSDEPTVNSPPLNGNGGT
SEKSRVSKFSLHPPSASIPSKSDPVAAAAAAAARINANLRAKGKLSDQTQHKPVVNTIQT
ANSALSAIQVSQIKKIFDLYVAKIDINNLPIVTRTYMTQVNAQEIINKQTGAAVSTKGQY
LTQDEKKNVEGIDKQLHLYVQSPSQDKVELAINKIKDMISKHNVSKSSLSAVAPTMVPPM
VSMPIPQNMVGQPSLPSGNYVHDKLFIGMDYVPPDFDLKTKLIGANYTNFNFVANSTGAK
VILRGRGSGFIEPTSGREAFESMYVFISHPNQAGVDAAKKLVNNLIEHVRNEYNAHTRKT
QSGFGNPQAAYPGNPPYGSNSVNYQPPSQFPSYPMGNIPPMGNPYMNYTQAPPNPYNMPQ
NITAHPNIPPPVPVPPPTFTPPTQPPFNPQATPNITPTPQAAPTSDMMPPPPPVAVKPTE
PAPKPTKRRRFKEEQPDDSNILGYQQFSKNSDQDSKKTKRNFSEKSTESLPNTTVEKDSK
EQTKSGSLPFWMSYD

Nucleotide sequence

Length: 2,083

>KH2012:KH.C6.272.v1.A.SL2-1
TTGCAGTGTATTAAGAAAATTAACTTGTATTTGTAAGTTTAAACTTTTAAATGTAAAAAT
TGTAAATTTAGAAAACTTTATTCTGCTGTTTTTGGATTAAACAATGTCAAAGGATTCTTG
GCGACAGAATTCAATGCCACCACGCCCAGATTATGGGAATTTTAAAGCACCTTCATTACC
GAGTGCAAACTCCAACCCAGCACCCAAGAAAACTCGCATTTCAAAGTTTTCTGACGAACC
CACAGTAAACAGTCCGCCGTTAAACGGTAATGGTGGTACTTCTGAAAAATCGAGGGTCTC
AAAATTTTCTCTCCACCCACCAAGTGCTTCCATTCCGTCAAAATCTGACCCTGTTGCAGC
AGCGGCTGCAGCAGCTGCAAGAATTAATGCAAACCTTCGAGCAAAAGGCAAGTTATCCGA
CCAAACACAGCATAAACCAGTAGTAAATACGATACAAACAGCAAACTCTGCGTTATCTGC
AATTCAAGTGTCCCAGATTAAAAAAATATTTGATCTTTATGTTGCAAAAATCGATATAAA
TAATCTACCAATAGTCACACGAACTTACATGACTCAAGTCAACGCACAAGAAATCATTAA
CAAACAAACGGGGGCTGCTGTTTCCACCAAAGGACAATATTTAACACAAGATGAAAAGAA
AAACGTTGAAGGAATAGACAAGCAGTTACATTTATACGTACAGTCCCCTTCACAAGACAA
AGTAGAGCTTGCTATCAATAAAATAAAAGACATGATTTCAAAACATAACGTCTCAAAGTC
TTCCCTAAGCGCAGTTGCCCCAACCATGGTCCCACCAATGGTCTCAATGCCCATCCCACA
GAACATGGTGGGCCAACCATCCTTACCAAGTGGTAACTATGTCCATGACAAATTATTTAT
AGGAATGGATTACGTTCCCCCAGATTTTGACCTGAAAACAAAACTTATCGGAGCAAATTA
CACAAACTTTAATTTCGTTGCGAACTCCACTGGAGCAAAGGTGATTCTACGAGGCAGAGG
ATCTGGTTTCATTGAGCCGACTTCTGGTCGCGAGGCTTTTGAATCTATGTATGTATTCAT
CAGCCACCCAAATCAGGCGGGGGTAGATGCCGCTAAAAAGTTGGTGAACAATCTTATAGA
GCATGTACGTAACGAATACAATGCTCATACCAGAAAAACACAGTCTGGATTTGGAAACCC
ACAAGCCGCTTACCCAGGGAACCCACCATATGGGTCCAACTCGGTAAACTACCAACCCCC
ATCCCAATTCCCATCTTACCCCATGGGTAATATACCCCCAATGGGGAACCCATACATGAA
CTACACCCAAGCCCCCCCTAACCCTTACAACATGCCCCAGAACATTACGGCTCACCCTAA
TATACCCCCTCCTGTCCCAGTACCCCCACCAACCTTCACCCCGCCTACCCAGCCCCCCTT
TAACCCCCAAGCGACCCCCAATATAACCCCTACCCCCCAAGCAGCACCTACAAGTGACAT
GATGCCACCTCCTCCCCCTGTTGCTGTAAAACCAACAGAACCAGCGCCGAAACCGACGAA
AAGACGAAGGTTTAAAGAAGAACAACCTGACGATTCAAACATCCTAGGCTACCAACAATT
CTCTAAAAACTCTGACCAAGATTCCAAAAAAACGAAAAGAAACTTTTCAGAAAAATCAAC
AGAAAGCCTTCCAAATACTACAGTAGAGAAAGATTCAAAAGAACAAACGAAAAGCGGTTC
ACTACCATTCTGGATGTCGTATGACTGACTGTTTTTATATAAAAATTCAACCCAAAAACG
GAGATGTTTCATTTCATGTGTTAGACCTTGTTTTAAGTTTTCCTTGTGCAGGATATAGAG
CTCGCTTTTGTATTTACCGTATTTTGCCTTTTCAATCATTCATTGTTATAAGCATCTGTT
TAAATTATCAGCAATTCCAAACATGTGATTAATTTTAGTTTTACCGCATATGGTTTCCAC
TTTCTAATAACACTATTATAACAATATAACAAAAGACCTTATCAAAAAACCTGCTTCATG
ATTATGGCAATTCAATTCCAATTAAACTGTTAGTATTTCTAAG

InterProScan

PANTHER
RIK/BLOM7 (IPR031121) - T[74-513] 8.6E-85
Gene3D
KH_dom_type_1_sf (IPR036612) - T[260-361] 2.2E-33
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[271-364] 1.41E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KHDC4_HUMAN 33.063 % 190 4.0E-53