- Transcript 'KH2012:KH.C6.43.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C6.43.v2.A.SL1-1
Possible name(s)
INPP5B; OCRL; SYNJ1
Gene model
Location
KhC6 [1,505,524 / 1,529,839]
Amino acid sequence
Length: 870
>KH.C6.43.v2.A.SL1-1
YIMDNHAYNDSSTPNNLIDLQPNTTEHLSEFDPFAPTVQKVTRKPSRPPPPPPNVPPRRT
NTVSEPLSQSALTTDLVNLDLDPKTEPKLVNVSKDDPPASIMHLDNSGQKYPDLPRPKSS
SFVSYISPTAPKPMEIVTNQNNINSSDSSRAGMHDVGRSAFSNFEGSTGKNELTSHLLER
DKLMPLYMAKRQDDYTSTAPFNVFVGTWNVNGQLPTEPLDAWVSSEATPPDVYAIGFQEL
DLSKEAFVFTESSREEEWMRAVKQALHPGASYKLVKHIRLVGMMLLVFAQDRHLQDITAV
ASHHVGTGLLGKMGNKGGVGIRIMLHNSSLCFINSHLAAHLEEIQRRNQDYEDICSRMKF
PDPEGQSISVFSNDVLIWLGDLNYRIDKLPLETVKERIEKGQYEKLKEHDQLTNQRREGN
VYPDFEEGDLTFRPTYKYNPGTDEWDTSEKCRCPAWCDRILWKESAKAKPRKTKRKDLVQ
LLKYQAHLSLKISDHKPVSAVFKINVKVINRELYRKVYEEEIRRLDRMENEWLPTMVLNQ
HSLEFGTVKFQQAVQRTVEILNTGQTPCHFEFIGKLGEKAFCKPWLTVGKPKGYVLPGDK
LVIEFEVYVNKNTAPSLNKEEDKIEDILILHLVGGKDFFITVNGKYSPSCFGTSIEALCW
MKKPIEQMDRKELTRLSCTESRDWQVNNEKHHSSQMLNVPKELWRLLDHLYQYARHQPDL
FQQPGLHEELKMIQENLDSQLPTVGTPLPGSNHSVAEALLIFLEALPEPVIPFEYYNMCL
QLYNNYDQGQELIHKMPPHHVNVFNYIISFLQELPKYEENGLNLHLLATIFSGLLLRPSS
VQRKQNTEGRMDRMKATSFIEMFLKKKLIE
Nucleotide sequence
Length: 4,073
>KH2012:KH.C6.43.v2.A.SL1-1
CGTAATTGCTACATTACTACTGTACAGTCTGTATGCTATGAAGACATGGACAAATTCACA
GCGGAGCTCTTTCAAGGCGTTTAAATGTTATTTTGAGGATATGGTTTAAGTATATGTGAT
ACATCAAAGTTTCAAAAGAGGTATAATACATCATGGATAACCATGCATACAACGATTCTT
CTACCCCAAATAACTTAATTGACTTACAACCAAATACTACAGAACATTTGTCAGAATTTG
ACCCGTTTGCACCAACTGTGCAAAAAGTGACACGAAAACCGAGCAGGCCACCACCCCCAC
CCCCAAATGTGCCTCCGAGAAGAACAAATACAGTTTCCGAGCCTCTGAGCCAGTCTGCTT
TAACCACGGACCTTGTAAACTTGGATTTGGACCCAAAAACTGAGCCGAAATTGGTCAATG
TCAGTAAAGATGACCCCCCAGCGAGCATTATGCATTTGGACAATTCGGGTCAAAAATATC
CAGATCTACCGAGACCAAAGTCATCTTCTTTTGTGAGCTATATTAGCCCGACAGCCCCAA
AACCTATGGAAATCGTGACAAATCAAAACAATATAAATTCAAGCGATAGCAGTCGTGCAG
GCATGCACGATGTGGGGAGATCGGCGTTTTCGAACTTTGAAGGATCAACTGGTAAAAATG
AGTTGACGTCTCATTTGCTTGAAAGGGATAAGTTGATGCCGCTCTATATGGCCAAGCGAC
AAGATGACTATACCTCAACTGCACCTTTCAATGTATTTGTTGGGACTTGGAACGTGAATG
GTCAGTTACCAACTGAACCATTAGATGCTTGGGTTAGTAGTGAAGCTACCCCACCGGATG
TATATGCAATTGGGTTCCAAGAGCTTGATTTGAGCAAAGAAGCTTTTGTATTCACTGAGT
CATCACGAGAAGAAGAATGGATGAGAGCTGTCAAGCAGGCCCTGCATCCTGGTGCTTCAT
ATAAACTGGTAAAACACATACGTTTGGTCGGTATGATGTTATTGGTGTTTGCTCAGGATC
GCCACCTTCAGGATATAACAGCAGTGGCTTCGCACCATGTTGGAACTGGATTGCTCGGAA
AAATGGGAAACAAGGGAGGTGTTGGGATCCGTATCATGCTCCACAACTCCTCTTTATGCT
TCATCAACTCCCATCTTGCTGCTCATCTGGAGGAGATTCAGCGAAGGAACCAAGATTACG
AGGATATTTGCTCCAGGATGAAATTCCCAGATCCTGAAGGACAATCTATATCTGTGTTTA
GTAACGATGTCTTGATATGGCTCGGTGACTTGAATTATCGAATTGATAAACTTCCTCTTG
AAACGGTAAAAGAGAGAATAGAGAAAGGACAATATGAAAAACTAAAAGAACACGATCAGC
TAACAAACCAGCGGCGAGAGGGTAACGTCTATCCCGATTTCGAGGAGGGTGACCTGACGT
TCCGACCCACTTATAAATATAACCCCGGCACTGATGAATGGGACACCAGCGAGAAATGTC
GATGTCCTGCGTGGTGTGATCGTATATTGTGGAAAGAATCGGCCAAAGCTAAACCAAGAA
AAACAAAAAGAAAAGACTTAGTTCAACTGCTGAAGTACCAAGCTCACTTATCATTAAAAA
TAAGTGACCACAAGCCTGTTAGTGCTGTATTTAAAATCAATGTAAAAGTAATAAACCGTG
AATTGTATCGGAAAGTTTACGAAGAAGAAATTCGAAGACTGGACAGAATGGAGAACGAAT
GGCTGCCTACTATGGTGCTAAACCAACACTCACTCGAATTTGGGACAGTAAAGTTTCAGC
AAGCAGTCCAGAGGACAGTAGAAATACTTAACACTGGACAAACACCTTGTCATTTTGAGT
TTATCGGCAAACTTGGAGAAAAAGCGTTTTGTAAACCTTGGTTGACAGTTGGTAAACCTA
AAGGATATGTTTTGCCAGGTGATAAACTGGTTATTGAGTTTGAGGTGTACGTGAATAAGA
ACACAGCCCCTTCACTAAACAAAGAGGAAGACAAGATAGAAGATATTTTAATTCTACATC
TTGTTGGGGGCAAGGATTTTTTCATCACTGTAAACGGCAAATACTCCCCCAGTTGTTTTG
GTACTTCCATTGAAGCTTTATGCTGGATGAAAAAACCTATTGAACAAATGGATAGAAAAG
AACTAACTAGACTGAGCTGTACAGAGTCGAGAGATTGGCAAGTCAACAATGAGAAGCATC
ATTCATCGCAAATGCTAAATGTACCCAAAGAATTATGGAGGCTACTTGATCATTTATACC
AATATGCAAGACACCAGCCAGATCTGTTCCAACAACCTGGTTTACACGAAGAATTAAAAA
TGATCCAGGAAAACTTGGATTCCCAGCTCCCCACTGTTGGTACTCCACTGCCAGGATCCA
ACCACTCGGTGGCAGAAGCGCTCCTTATATTTCTTGAAGCGTTACCCGAACCAGTTATCC
CGTTTGAATATTACAACATGTGTTTACAACTTTATAATAACTATGATCAGGGCCAAGAGT
TAATACACAAGATGCCTCCCCACCATGTTAATGTGTTCAACTACATTATCTCATTCCTAC
AAGAACTACCAAAGTATGAAGAAAATGGGTTGAATCTTCATTTACTTGCTACCATCTTCA
GTGGTTTATTATTACGGCCATCATCTGTACAAAGGAAACAAAACACCGAGGGTAGAATGG
ATAGGATGAAAGCCACAAGCTTTATTGAGATGTTTTTGAAAAAGAAACTTATAGAATAAA
AAATGTACGAAAATGTTCAATTTTTGTTCTGAGAACAAAATGAAAAAAGGGATTTTTTAG
TCTGTTTTTAGTTTAGTGTGTGTTTATTTTTTAATGGGGTAATTTTTACTTGACGGCAAA
TTTTTGGCAAGTTGCAGTTGTTCTGGCCAGTTTTAATCTAAGGTGCTTTATGGCCAATAT
GTATGGGCCATATATATATATATATATATATATATATATCAATACAAATATACAATGCTG
CGGAATCCCAGATTCTGTCATGCGTAACTATTAAAAATTTATCACTTTTTTTGTGAAAAC
TTGTCTTAAAAAATTGTCCACAGTTTTATTTAAGTTATAAATGCCACATAAATTAATATA
GAATTACTACGCCCTTTAACTCAGTGGTAAACCTTGCCAATTATGTCGTGTTAGCAATAT
ATTTGTGTCCATTTATCTGGCTTTGCTTATTTAAAGCCTACTTACTTCAAAGTACAATAT
AGTGTTAACCCAGTATGTATGTAACCAGTGGCGCAGCCAGGGGGGTTTTCAGTGGGTCGT
GACCCCCCCCTTTTAAACCCCAAAAAATATTAAAAAAAAATATTTTTTTTTAATCAAATT
TTTTTTGATTGAAACTCCCTCATTATTTTTGTTCTGGCTGCGCCACTGTATGTAACGCAC
ATGTTGTTATAAGTATGTGTTAAAACATGGTTAAAATTACTCAATTATACATTATGTAAT
TTTAATCTCATAGTATTTATGTCTTTCAGTAACCCTTGATACACAGTTTAATTGAAAATC
CCAAATAACCTTGTCGATATTAGTTCATTTTTAAATTAAAACCTCGTTTTTTTTTCTGAA
TATTTGGATTGTTTTTTGTAATGTATTTTTTTCACAATAATGTGCAATATCATGTGGCAT
CCAAATTTACAATGTTGAAAAGTTTACAAGCAGGACCCATGTCTTCGAAATGGTGTTTCC
ATATTTTTACTTCACCGCATTGTGTTTGTGTTTTCAAATAAATTTAAATACCTAATGTGC
AACACTATTCATAAGTTCCTATTTGATAAGTGGCCAAAAACATGGGAATTTTGCCTTGAT
AGTAATTTCCCACAAAATTTGGCCTACATTTATATAAGCTGTGTTGGAAGACAAGCTATA
AAATCTTATACAGGTTGTGATATTCTTTTAAAAAACAAAAAACCTGGCTTACTTTTATCT
GTATACTCGCTGTCCAGTTGTACCTTGGCTGTCTTGCTTGTTTATAACATGTAAGACAGA
TGTATGATTTACATTACATATCATATTGTGTTTATAATATTTTCCATTTCTAG
| Gene3D |
Endo/exonu/phosph_ase_sf (IPR036691) - T[177-534] 4.6E-132 |
| SUPERFAMILY |
Endo/exonu/phosph_ase_sf (IPR036691) - T[188-531] 1.18E-66 |
| SMART |
IPPc (IPR000300) - T[199-510] 1.5E-106 |
| CDD |
OCRL1/INPP5B_INPP5c (IPR037793) - T[201-504] 0.0 |
| Pfam |
Endo/exonuclease/phosphatase (IPR005135) - T[206-495] 3.8E-7 |
| Gene3D |
Ig-like_fold (IPR013783) - T[535-660] 1.7E-42 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[646-664] 9.22E-28 - T[696-864] 9.22E-28 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[686-870] 18.343 |
| SMART |
RhoGAP_dom (IPR000198) - T[697-868] 8.9E-26 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[699-868] 6.7E-45 |
| Pfam |
RhoGAP_dom (IPR000198) - T[700-840] 4.1E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| I5P2_HUMAN | 49.057 % | 671 | 0 |
| SYNJ1_HUMAN | 35.519 % | 227 | 1.79E-61 |
| OCRL_HUMAN | 48.058 % | 674 | 0 |