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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'Phmamm.CG.MTP2014.S2...'
  3. Transcript 'KH2012:KH.C3.101.v2....'
  4. Transcript 'Phmamm.CG.MTP2014.S2...'
  5. Transcript 'KH2012:KH.C7.159.v1....'

Transcript Model

Transcript Id

KH2012:KH.C7.159.v1.A.SL3-1

Possible name(s)

LSM7; LSM8; SNRPG

Location

KhC7 [947,819 / 949,660]

Sequences

Amino acid sequence

Length: 119

>KH.C7.159.v1.A.SL3-1
SAQFKLEQILIFPFLNIQENMGDKRKKESILDLSKYLDRPIRVKFHGGREASGVLKGFDP
LLNLVLDSTTETLRDPDDPYKLSDDTRALGLTVCRGTSVVLICPQDGMEEIPNPFVQHT

Nucleotide sequence

Length: 1,084

>KH2012:KH.C7.159.v1.A.SL3-1
CTCTGCTCAATTTAAACTTGAACAAATCTTGATTTTTCCATTCTTGAACATCCAAGAAAA
CATGGGGGACAAAAGGAAGAAGGAAAGTATTTTGGATCTTTCAAAGTATCTTGATCGACC
AATCAGAGTAAAGTTCCATGGAGGGAGAGAGGCAAGTGGTGTGCTGAAAGGTTTCGATCC
GCTGCTTAATTTGGTGCTTGACAGTACAACAGAGACTTTAAGAGATCCAGATGACCCTTA
CAAGCTGAGTGATGATACGAGGGCATTGGGGCTTACTGTGTGTAGAGGCACTTCTGTGGT
TTTAATTTGCCCACAAGATGGCATGGAAGAGATACCAAATCCGTTTGTTCAGCACACATG
AAGAAGCAATTAAATTTGTAAAATCTTAATTCAATTATAAGTTGGTTGGATTGAAAACAG
GGAGCTACCATTCATTATCATCCACTAACTGATTTACTCTGCCATTCTTCTTTTATTACA
TTATGTTTATAGCTGTTTTCCTGAAAAAAAAAACAAAAACATCTAAGTCTTTAATCTTGC
TGAAAAAAGAAACTCAATTCTTTAATATTATGACCGCCATTGTAGCAAACTAGAGTTGAA
TGTTCTGTGATATTCAATATGTTTTACATACTGAACTTATTTAGAAAGACAACGATCGCA
GTGCAACAAAAGTTTATTGCAAAAAAAGTCTGAGTAACTAGAGTCTCAAGCATTTACATT
AAAAAGCCGGTGAAATACACTACATGGTGTTAACACACCTTTGAAAAACCTCCAACAAGT
TTACATCTAATGTGGAAATATTAGGGGTTTAAAAAATTTGTTTAAAATTATTGGAATGGC
TTGTAAGGGTTAACATTTAGTACGTGTTAGGGAAGAATACAAAAGTAATGTAAAGTATTG
GATAACATTAGTCTAGTTATTTGATGTTCTCAAACAATAACATTTTATATAATAAGTTAC
AGTGCCAATAACAATTTGTTCTGCTTTTTCAGTAACATTCTTAGATTCTTTAATACTATT
CTGTGGGTATGCAAATGTATGATATTTAAGTTTGAAAGTGTTGAATGCGGGTGCAGTCAG
TTCA

InterProScan

CDD
Lsm7 (IPR017132) - T[27-115] 8.74116E-60
SMART
LSM_dom_euk/arc (IPR001163) - T[31-104] 3.1E-21
Pfam
LSM_dom_euk/arc (IPR001163) - T[32-104] 3.6E-19
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[33-109] 1.18E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LSM7_HUMAN 80.208 % 166 5.43E-55