- Transcript 'KH2012:KH.C7.178.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.178.v1.A.SL1-1
Possible name(s)
HECTD2; HERC4; UBE3A
Gene model
Location
KhC7 [5,585,707 / 5,599,525]
Amino acid sequence
Length: 924
>KH.C7.178.v1.A.SL1-1
YTMYSSGLPLTPSKPRPPSRGTPTRGTPPHEPRQTNRPQKLPPIRKKSSGKSQVDHRDNK
HNESSKSGNANPEGAVPTIETTDDETSSSKLGEDLFLSEDPPRPRNPFNDLVHPITPPSM
CGDASLGGAEGLKRPRINPNNLHGIQASKSQEFTPQDPSSPSTRITCRSAGDMRKTLRES
EDRKPFVVFGIKQFRHELDKWKKTKKVYKLQEFYRAVFDSFESINETFKKNSVPSCRSRN
GRSSRWVKRDRIPDPCLQHKFVGLVYEVLTLMPREVQKLVLKGIVNCLLNEWKSAKQESD
LRAYFILLQNPLFTQTNTYGVFAHLLRQVATFNEHDQTLVTHWLRRLSTPRFRPIIERIH
QFIQLRLFPGQSELPPMSNCGWWIPSAVKVLSMLNKANEMIKPRLVSFREFYNHSIDHID
VTAEYRQWENPASHSGFTFCQFPFILSLLAKLKILRRDQEREMIRTARDELVEFVRRRPT
RVPCVSQLYLNISVRRQNLLQDSLDQIYGNRKQLKKKLRVSFIGEPGYDMGGLTKEWFLL
LLRKVLAPDYNTFVYNNKSHCYWFADNGCENSSDLFLVGVLMGLAVYNCITLDIRLPLVC
YKKLLSSVPKSGVQQPDSISGPNISETGSPVSGQTIQQTGSAVSQTGQTISQTDSTSQQS
GPASQQSGPNSQQSGPTSQQAENEKETINQNLCGVIPVTLEDYRSIDPDMVRGLEELLNY
DGDVEDDFGLTFQTTRSELGNIRSIPLKRGGEEISVTEFNRDEYVQAYLEYKMNRSVYRQ
FLAFYHGFYTVCSSNALTFLCPEELEVLICGNAVFDLKDLKKHTAYQGYRSNDPTIIYFW
EVLLSLPRELQKKFLHFCTGSDRVPVGGMQELNFKIVRTPTAQNMLPMAHTCFNQLLLPP
YGNKQHLEGKLIIAVSNAEGFGLE
Nucleotide sequence
Length: 3,537
>KH2012:KH.C7.178.v1.A.SL1-1
GTCTTTTGGTTAAGTTGGGTTAAAAACGAGACTAAATTTAAATGGAGTAATACACAATGT
ACTCTTCGGGGCTTCCCCTTACCCCATCCAAGCCCCGACCACCTTCTCGAGGAACCCCAA
CAAGAGGGACTCCCCCCCACGAACCCCGTCAAACCAATCGGCCCCAAAAGTTGCCCCCAA
TAAGAAAGAAATCTTCAGGGAAATCCCAAGTTGACCATAGAGATAATAAACATAATGAGT
CGTCAAAATCAGGCAACGCAAATCCAGAAGGAGCTGTTCCCACCATTGAAACGACCGATG
ACGAAACTTCTTCTTCTAAACTAGGGGAAGATCTGTTTTTAAGTGAAGACCCACCCAGAC
CGAGAAATCCATTCAACGATTTGGTCCACCCCATCACCCCCCCTTCCATGTGTGGGGACG
CATCACTGGGTGGCGCTGAAGGGCTAAAACGACCTCGAATAAACCCCAATAATTTACATG
GAATACAGGCATCGAAATCGCAGGAATTCACCCCCCAGGACCCCTCGTCACCAAGCACTC
GTATAACATGTAGAAGCGCTGGGGATATGAGGAAAACATTGAGGGAAAGTGAAGACAGAA
AACCCTTTGTTGTGTTCGGGATCAAACAATTCAGACATGAATTGGACAAATGGAAGAAAA
CAAAGAAAGTTTACAAACTACAAGAATTCTATCGAGCTGTATTTGATTCGTTTGAATCCA
TCAATGAAACATTCAAGAAAAACAGCGTTCCAAGCTGCAGGTCACGCAATGGGCGAAGTT
CGAGGTGGGTGAAGCGTGACCGGATACCGGACCCGTGTTTGCAACACAAGTTTGTGGGGT
TGGTGTATGAGGTGCTGACGCTAATGCCACGCGAAGTACAGAAATTGGTCTTGAAAGGAA
TTGTCAATTGTCTTCTCAATGAATGGAAAAGCGCAAAGCAAGAAAGTGACCTTCGTGCTT
ACTTTATTTTGCTGCAAAACCCCTTGTTTACCCAAACCAACACGTATGGTGTGTTTGCTC
ATCTATTGAGACAAGTGGCTACATTCAATGAACATGACCAAACCCTGGTCACTCATTGGT
TAAGAAGATTGTCGACGCCCAGGTTTCGACCAATCATAGAGAGGATACATCAGTTCATAC
AACTCCGTTTATTTCCCGGCCAATCAGAATTACCTCCCATGTCTAACTGTGGTTGGTGGA
TTCCTTCTGCGGTCAAAGTGCTTTCAATGCTAAACAAAGCGAACGAGATGATAAAACCTC
GCTTGGTTTCGTTCCGTGAGTTTTACAATCACAGCATCGACCACATTGATGTCACTGCAG
AGTATCGACAGTGGGAAAACCCCGCCTCACATTCAGGATTCACATTCTGTCAGTTCCCCT
TTATCCTTAGTTTACTGGCCAAGTTAAAGATCTTACGTCGCGACCAGGAACGTGAGATGA
TTCGAACAGCACGCGATGAACTTGTCGAGTTCGTTAGGAGACGACCAACACGAGTCCCCT
GTGTGAGCCAACTCTACTTAAACATATCGGTTAGGCGTCAAAACCTTCTGCAGGATTCGC
TCGACCAAATATATGGAAATCGCAAACAGTTGAAAAAGAAGTTACGAGTTTCCTTCATTG
GCGAACCAGGATATGACATGGGAGGTTTAACTAAGGAGTGGTTTCTACTATTGTTGAGAA
AGGTTCTAGCACCAGACTATAACACATTCGTATACAACAACAAATCTCATTGTTACTGGT
TTGCGGACAATGGTTGTGAAAACTCGTCGGATTTGTTCCTCGTTGGCGTTCTCATGGGGT
TAGCAGTTTATAACTGCATAACATTAGACATAAGGTTGCCGCTTGTGTGTTACAAAAAGT
TGCTTTCATCTGTCCCTAAATCTGGTGTGCAACAACCTGACTCCATTTCTGGTCCCAATA
TTTCTGAAACTGGTTCACCTGTTTCTGGCCAAACTATTCAACAAACTGGTTCAGCTGTTT
CTCAAACTGGTCAAACTATTTCCCAAACTGATTCAACTAGTCAACAATCTGGTCCAGCTA
GTCAACAATCTGGTCCAAACAGTCAGCAATCTGGTCCAACTAGTCAACAAGCAGAGAATG
AAAAAGAGACAATCAACCAGAATCTTTGTGGTGTGATTCCAGTAACACTTGAAGATTACA
GAAGTATTGACCCTGACATGGTGAGAGGATTAGAGGAATTGTTGAATTATGATGGGGATG
TGGAAGATGACTTTGGACTGACTTTCCAGACCACCCGAAGTGAACTAGGCAACATACGGA
GCATTCCATTGAAACGGGGTGGGGAAGAAATATCGGTCACTGAGTTTAATCGTGACGAAT
ACGTGCAAGCCTACTTGGAGTATAAGATGAATAGATCAGTGTATAGGCAATTCCTTGCAT
TCTACCACGGTTTCTACACCGTTTGTTCATCTAATGCATTAACTTTCCTTTGCCCTGAGG
AACTTGAAGTGTTAATATGCGGGAATGCTGTGTTTGATTTGAAAGATCTGAAGAAACATA
CAGCTTACCAGGGTTACCGTAGCAATGACCCAACCATAATTTACTTCTGGGAAGTTTTAC
TATCGTTGCCACGGGAACTACAGAAAAAGTTTCTCCACTTCTGCACGGGGAGTGACCGGG
TACCAGTAGGTGGCATGCAAGAGCTCAACTTTAAAATTGTTCGGACACCAACTGCACAAA
ATATGCTCCCAATGGCACACACATGTTTCAATCAACTACTTCTCCCACCTTACGGCAACA
AACAACATTTAGAAGGAAAATTAATCATAGCTGTGAGTAATGCAGAGGGGTTTGGCCTTG
AATGAGTGGTGTGATGTCATAGGAGGAACCTATGATGTCACAAGGAGCAGCTATGATGTC
ATAAGGGGCAGCTGTGATGTCACAGGGGAGTGTTTAGTTGCCTTGTATGTGTTTATCTTG
CATGTGTAGTTTGTAAATTCCACCCCATGTTTCACACATTATGTGGTAAAGTACTAATTG
TTAAATATGTTGTAATACTTCAGTATTGGTATCTGCTTATACATCAGAACAACTAATTTA
CAATCCATATACTATACGCCTCAAAATTGTTGGTTTCAAACTTACGTAATTGCCTATTGT
ACAATTAATGTTAATTTCTGGTACTATACTACAGTCGTACTCTGGTACTATTCATATCTT
TGGTGCTTTACCTTTGAACTGTGATTATTTTTGCACCTTTTCTATCCTCGACGCGTTTCT
CCCTGAAACTAAAGTGTCCGCACGCAGCACTGTATCAGTATTTAGACTGTGTTTGCTGTG
TTTGCTTTCAAACCAATTAAAACTCATATTTGTTAAACTATGTTGTTAATATTCAAGTAA
AATTTTAAAATTGTAACTTCATTGTCATTCCGAAACTGTACTATGATGTCATAATTTGAG
ATTATTACTAAACAAACAAAGTTACATTCTTTCGTTAAAAATGTTTCAAAATTTGTTTTC
ATGCTCTTTGTAAATTTTGACGTAGTTTTTGTGATTTCAATAAAATGGTTACCTTGA
| SUPERFAMILY |
Hect_E3_ubiquitin_ligase (IPR035983) - T[485-605] 4.53E-102 - T[695-917] 4.53E-102 |
| CDD |
HECT_dom (IPR000569) - T[490-922] 2.33581E-109 |
| SMART |
HECT_dom (IPR000569) - T[508-924] 4.1E-90 |
| ProSiteProfiles |
HECT_dom (IPR000569) - T[510-924] 75.711 |
| Pfam |
HECT_dom (IPR000569) - T[540-616] 8.6E-6 - T[691-924] 2.8E-71 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC4_HUMAN | 41.778 % | 181 | 1.18E-46 |
| UBE3A_HUMAN | 41.228 % | 179 | 1.95E-46 |
| HECD2_HUMAN | 49.64 % | 439 | 2.25E-141 |