- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C5.217.v3....' >
- Transcript 'KH2012:KH.C6.126.v1....' >
- Transcript 'KH2012:KH.C3.279.v1....' >
- Transcript 'KH2012:KH.C8.162.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.162.v1.A.ND1-1
Possible name(s)
ZNF227; ZNF233; ZNF235
Gene model
Location
KhC8 [4,580,805 / 4,582,748]
Amino acid sequence
Length: 320
>KH.C8.162.v1.A.ND1-1
KENEIITKSYICKYCDKSLHGPGSLAYHLRTHTGEKPFKCETCGKEFASKANLKRHGLIH
LGVKSHKCDECGKSFLDNQSLVAHQKFHTGKRDYQCPVCGMWLFTFSGLKTHKRMHTGEK
PFKCKICDKAFGQNHNAKHHYQGHFKTHPSKCDICLTVNINLKRDLEKSLEKFINEIPSA
ESSNAKSHQKIDTETVLHVKEHITQYIAFTPYTCNICDARYSQKKNLRFHKMSHTGEKPF
KCKVCGIKCRRPSALKTHMRVHSDERPYKCQICGRGFKDSGTAASHQTTHSKECRFKCLL
CDKPFRCKSSLKNHEKVHYQ
Nucleotide sequence
Length: 1,943
>KH2012:KH.C8.162.v1.A.ND1-1
GATTGCATATAGACAATCGCTATAGCGAAAACAGAGGTAAACAAGTCGTGTTTAGCCTTT
ATATGGAAACTAAAGTAATTAGAAGTTAGGAAAGAATGGCGACAGTTAGTTCAAACGAGA
AAAATAAAAAGAAAACGAGATCATTACCAAATCTTACATTTGCAAATATTGTGATAAAAG
TTTACATGGGCCGGGTTCACTTGCGTATCATTTAAGAACACATACGGGTGAAAAGCCTTT
TAAGTGTGAAACTTGTGGCAAGGAATTTGCAAGTAAAGCAAATCTGAAAAGACATGGATT
AATCCATCTTGGAGTGAAATCACATAAATGTGATGAATGTGGAAAGTCGTTTTTGGACAA
TCAAAGTTTGGTCGCGCACCAAAAATTTCATACTGGTAAACGAGACTATCAGTGCCCTGT
GTGTGGTATGTGGTTATTTACCTTTTCTGGTTTAAAAACACACAAAAGAATGCACACTGG
TGAAAAGCCATTTAAATGCAAGATATGTGACAAAGCATTTGGACAAAATCATAATGCGAA
GCATCATTATCAAGGTCACTTTAAAACTCATCCTTCGAAATGTGATATATGTCTTACTGT
TAATATAAACCTAAAACGTGACTTGGAAAAATCGCTTGAAAAGTTTATAAATGAAATTCC
TTCAGCGGAGTCGAGTAATGCAAAATCGCACCAAAAGATTGATACTGAGACAGTGCTGCA
TGTTAAAGAACACATCACACAGTACATTGCATTTACTCCTTACACATGCAATATATGTGA
TGCAAGGTACAGCCAGAAAAAAAATCTGCGATTCCATAAAATGAGTCATACCGGAGAGAA
ACCATTTAAATGTAAAGTATGTGGTATAAAATGCCGCCGGCCATCAGCTTTGAAAACACA
TATGCGGGTCCACAGTGACGAGAGGCCTTACAAGTGTCAAATTTGTGGGAGAGGTTTTAA
AGATAGTGGTACTGCTGCATCACACCAAACTACACATTCTAAAGAATGTCGTTTTAAATG
CTTGCTGTGTGATAAGCCCTTTAGGTGTAAAAGTAGTTTAAAGAATCATGAAAAAGTGCA
CTACCAGTAGTGAAAACCTACCTTTTAAGGAAAGCAAAATACTTTTTTTTAAATTCTCAA
TTCTGTTTCATTTGAATTAACAGGCACAACAGATTGCTTTATTAGGGTATGACACTATAT
TGGAGTTTTTTATTTTAATATTTTTAGAAAACTTGATATGCATTGCCCTACCTTTATAAA
AGTGTAATATGCAATTTAAAATGACACATACATACATAGTATATAATTATTTGTAAAACA
AGTATTCATGCAACTTTGTATATCTTTCTGTACATGAACTATATATATACTAGACTAACT
ATTAAAATGCTTGCCAATATAGTGTCTAATTTCTTGCCAAATGTTTTGTGCAATTTAAAT
TTTTGCTTTATATATGTACACAGCAAACACACAATTTTCTTATCGTTATTTTATTGAATG
TATTTACACAACAATGATTATAAGTTATAACACGTTTTAAATGCAATTGCCAGAGTGCCC
AATATTTGCTTTATTATAATAATTTGGTCTTTTATGTTAGTATTAAGCTGTTACTCTAAT
ATATACATATCATAAATCTTATTACTTGCCATAAATATATCACCAGGTTTCAATTTTGTT
TTTCATTCATATATATAAACATATCACATGTTTCACAACTGCATTTTTCATATATGTTTG
ATGTTTGAATTATATATTACTTAACGTCATCATTTCCTAACACTTTTTAACACACAGCCT
TTTACAACAGCGTTTTCATATTCCAGTTAAAAAGTTATGATTTTACAGATTATTTCGCTA
CTTAAATTTTGTGTGAAAAAGCAATTACTTTTAAACAATTGTTAAACCAAAGCTAAAGCT
TACTAACATTTTTCATTGCACAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[8-60] 1.02E-16 - T[47-101] 2.81E-17 - T[93-144] 8.4E-14 - T[221-277] 1.75E-19 - T[262-314] 2.02E-13 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[10-37] 14.233 - T[38-65] 13.568 - T[66-93] 14.794 - T[94-121] 13.983 - T[122-149] 10.907 - T[212-239] 13.983 - T[240-267] 13.484 - T[268-295] 11.489 - T[296-320] 11.801 |
| SMART |
Znf_C2H2_type (IPR013087) - T[10-32] 0.0043 - T[38-60] 0.028 - T[66-88] 0.013 - T[94-116] 0.0054 - T[122-144] 0.71 - T[212-234] 0.02 - T[240-262] 1.6E-4 - T[268-290] 0.062 - T[296-318] 0.037 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[12-32] . - T[40-60] . - T[68-88] . - T[96-116] . - T[124-144] . - T[214-234] . - T[242-262] . - T[270-290] . - T[298-318] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 40.193 % | 219 | 1.23E-64 |
| ZN235_HUMAN | 36.527 % | 218 | 2.18E-65 |
| ZN888_HUMAN | 39.423 % | 212 | 2.53E-63 |