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TRANSCRIPT CARD

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  1. EST 'AHC0AAA231YA18_RM1' > 
  2. Transcript 'KH2012:KH.C8.225.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.225.v1.A.SL2-1

Possible name(s)

MED16

Gene model

KH2012:KH.C8.225

Location

KhC8 [3,805,865 / 3,814,913]

Sequences

Amino acid sequence

Length: 830

>KH.C8.225.v1.A.SL2-1
GMDPVYEIDWQADVNQITLGHGDIVECAWSASNFFAFTTEKNNQGSVTQYLHILNPNQPW
GVFSTKYNDGAITCLQWDHTGTRLVSGDNHGLCCLWTMSNSLCNVWTHQNKHNIFLEGEE
ILSLGWLHNGARFLFHIDKMESSNLGEKFDRAKFWPTVMQHGGKAMEGFIVVTGSGLAAV
RLLLVDGESVESQFRLNVMCHQQIADIAFTSQGKVVVMTTDSEIQHFIQFHEIQLTYNTQ
DHLISHEVSALPSLQLRCASEEHSPYTYISHAHFVSRENQDHVLICVSGPTGSKFESWLI
RKESVQLHRIFQQNTNPVSTTPDVSKCWHYVTNSTHLPQVLNFSIPTLPIDASSSENKVS
QESKFFCGFCFAVALADNTIQILHRLFLQVLVTQHLPVTTNSQETTPGKAMKMTQQFGVR
HVSFSTLSCAMIAADKHGRLLLYRIPPWLTTPNRTNTMQSLKQLLQLMLYCLVSGKEWWE
ILLHVHPNLVEPLVKQLSVECGNQTSAVQQVLELRLQALKISIYHITASPVATDLHLKML
FQAISLVFRSLVRPHQQVGGEEIDPATKLQNISRTSTETNIDQLVQNVDTDPQTLQSMQQ
LIQWVADVALYLLASVPLYKQANRPGYSLYWDRDWLSLLREMLVLIRVWGLLKSACSPVF
NVLDSRMDVLSHVFKLVTQLWMASTDDHRMTDLPTSLINECSALPFHIIIPPLEPTPPPN
SVLSQMRNFSGTRRFTFGETPQDSYIMLSRQHMMDHVAVAGSSGKVDSLRRIFLGKSPNQ
ELKECVRCGVTTTCNNLLRSTLKVWDQRFVSSCVCGGHWKKLNSHPVPLH

Nucleotide sequence

Length: 2,932

>KH2012:KH.C8.225.v1.A.SL2-1
ATACATTTAGCTGCATAGGTTAGGGAATGGATCCTGTTTATGAAATAGATTGGCAAGCAG
ATGTCAACCAAATAACTCTTGGTCACGGTGACATAGTAGAGTGTGCGTGGTCAGCAAGCA
ACTTTTTTGCGTTCACAACTGAAAAAAACAACCAAGGTTCAGTCACTCAGTATCTTCATA
TATTAAACCCCAACCAGCCATGGGGTGTATTTAGCACTAAATATAATGATGGTGCAATTA
CTTGCTTGCAGTGGGACCATACAGGTACAAGACTCGTATCAGGTGACAACCATGGCTTAT
GCTGCCTGTGGACAATGTCTAACTCCTTGTGTAATGTGTGGACTCATCAGAATAAACATA
ACATTTTCCTGGAAGGAGAAGAAATATTATCATTAGGCTGGTTGCATAATGGTGCAAGGT
TTTTATTCCATATCGACAAAATGGAGTCATCGAACTTGGGTGAAAAATTTGATCGAGCAA
AATTTTGGCCAACTGTTATGCAGCATGGTGGGAAGGCTATGGAAGGTTTTATCGTTGTTA
CTGGTTCGGGGCTTGCTGCTGTGAGACTACTTCTTGTTGATGGCGAAAGTGTCGAGTCAC
AGTTTCGTCTAAATGTGATGTGTCACCAACAAATTGCTGATATTGCATTTACGAGCCAAG
GTAAAGTGGTTGTGATGACAACAGACAGTGAGATTCAACATTTCATTCAATTCCATGAAA
TTCAACTCACATACAACACACAGGATCATCTTATATCACATGAGGTATCTGCACTTCCAA
GTTTACAGCTACGTTGCGCAAGTGAAGAGCATTCACCTTACACCTATATATCTCATGCTC
ATTTTGTATCACGTGAAAACCAAGATCATGTGCTTATTTGTGTTTCTGGGCCGACTGGTT
CAAAATTTGAAAGTTGGTTGATTCGTAAAGAGAGCGTTCAACTACATCGAATATTTCAAC
AAAATACGAACCCAGTGTCAACCACACCTGATGTTTCTAAGTGCTGGCATTATGTTACGA
ACTCTACACATCTGCCACAGGTTCTTAACTTCTCCATACCCACCCTTCCCATTGATGCTT
CATCCAGTGAAAACAAAGTCTCACAGGAAAGCAAGTTTTTCTGCGGCTTTTGTTTTGCAG
TTGCACTTGCAGACAATACAATTCAAATTCTACACAGGTTATTTCTGCAGGTGTTGGTAA
CTCAGCACTTGCCAGTAACAACTAACTCACAAGAAACAACACCTGGTAAAGCAATGAAGA
TGACCCAGCAGTTTGGAGTCAGACATGTTTCATTTTCAACACTTTCTTGCGCTATGATAG
CAGCAGATAAACATGGTCGTTTACTTTTATATCGTATTCCACCATGGCTAACCACACCTA
ACAGAACAAACACTATGCAATCATTGAAACAACTTCTACAACTTATGCTCTACTGTCTTG
TATCTGGAAAAGAATGGTGGGAAATTCTGCTTCATGTTCATCCCAACTTGGTGGAACCAC
TGGTGAAGCAACTTAGTGTGGAGTGTGGTAACCAAACATCAGCTGTACAGCAGGTGCTAG
AGTTAAGATTACAAGCATTAAAGATCAGCATATACCACATCACTGCTAGTCCTGTTGCTA
CTGATCTACATCTTAAAATGCTGTTTCAAGCTATTTCTCTTGTGTTTCGTTCTCTTGTTC
GACCCCACCAGCAAGTGGGGGGTGAAGAGATTGACCCCGCTACTAAGCTACAGAATATAT
CCAGGACATCCACAGAGACCAACATTGATCAGTTGGTACAGAATGTTGATACTGATCCAC
AGACCTTACAATCAATGCAACAACTTATACAATGGGTGGCAGATGTTGCTTTATATTTGC
TTGCGTCTGTGCCACTATATAAACAAGCCAACCGACCTGGCTACTCTTTATATTGGGATC
GTGACTGGCTATCCTTGCTTCGTGAGATGCTTGTACTTATAAGGGTCTGGGGGTTGCTCA
AGTCAGCGTGCTCACCTGTGTTTAACGTGCTCGACTCACGGATGGATGTCTTGTCTCACG
TGTTTAAACTCGTTACTCAACTTTGGATGGCTAGCACTGATGATCATCGTATGACCGATC
TACCAACCAGTTTAATCAATGAATGCAGTGCCTTACCCTTCCATATTATAATCCCACCCC
TTGAACCAACCCCACCACCCAACAGTGTGCTTAGTCAGATGAGAAATTTCAGTGGTACTC
GAAGGTTTACATTTGGAGAAACTCCACAGGATAGTTACATCATGTTGTCACGCCAACATA
TGATGGATCATGTTGCTGTTGCTGGTAGCTCTGGAAAGGTTGACTCACTTAGAAGGATTT
TCTTGGGAAAGTCACCAAATCAGGAATTAAAAGAATGTGTTCGGTGTGGCGTCACAACAA
CTTGCAATAATCTCCTGCGTTCCACCCTGAAAGTTTGGGACCAACGTTTTGTTTCCAGCT
GTGTGTGTGGTGGCCACTGGAAGAAGTTAAACTCCCATCCTGTTCCATTGCATTGAATTT
GAATTAGAACTACATGTTTCCGTGCTACGTGTTTACATTTCTTGCACTGCTATCATTTTT
CTAATTGAAAAGCTCACATCTGCCTTTAGTTCATGTCGTTTCTTTTACCGCTTAATCATG
TAACAATTAAACCCAAAAATTTCCATGGTTTAGAATATTAAGTAGTCATTTTGAAATCCT
ACTTTTTTAGCCTAAACTGGAATCATTTTTTGGTTCGTTGAGATATTGCAAACTACCAGA
TCTGATAATCGTTTATTTTGGGCAACTTTTTGACGCCGCGGGGTTTGAAAAACGAAGTTC
TTCTGCAATTTCCCTACGATGAAAGCTAACATGTGCATGTTACTGTCAGTAGAAATTGAG
GAAGGCTGGGGTAAATTGAGACATTACGTGTTTGTTTATTTTTATCCATATG

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[5-228] 5.3E-9
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[20-131] 1.08E-9 - T[170-228] 1.08E-9
Pfam
Mediator_Med16 (IPR021665) - T[117-820] 1.9E-50

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MED16_HUMAN 34.736 % 473 3.39E-154